STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010017305annotation not available (274 aa)    
Predicted Functional Partners:
ENSUPAP00010012326
annotation not available
   
 0.998
RANBP2
RAN binding protein 2.
   
 0.998
NUP54
Nucleoporin 54.
   
 0.993
NUP214
Nucleoporin 214.
   
 0.991
NUP58
Nucleoporin 58.
   
 0.988
NUP93
Nucleoporin 93.
   
 0.986
NUP155
Nucleoporin 155.
   
 0.981
NUP98
Nucleoporin 98.
   
 0.980
NUP205
Nucleoporin 205.
   
 0.979
NUP88
Nucleoporin 88.
    
 0.979
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.