STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIAO3Cytosolic iron-sulfur assembly component 3. (476 aa)    
Predicted Functional Partners:
CIAO1
Cytosolic iron-sulfur assembly component 1.
    
 0.988
CIAO2B
Cytosolic iron-sulfur assembly component 2B.
    
 0.987
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 0.982
CIAO2A
Cytosolic iron-sulfur assembly component 2A.
    
 0.982
NDOR1
NADPH dependent diflavin oxidoreductase 1.
    
 0.916
NUBP1
Nucleotide binding protein 1.
   
 0.907
CARNS1
Carnosine synthase 1.
   
 0.865
NUBP2
Nucleotide binding protein 2.
   
 0.865
NUBPL
Nucleotide binding protein like.
   
 0.854
ENSUPAP00010001170
annotation not available
    
 
 0.793
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.