STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCXDoublecortin. (365 aa)    
Predicted Functional Partners:
POT1
Protection of telomeres 1.
    
 0.901
DCLK1
Doublecortin like kinase 1.
    
 
0.880
TUBB6
Tubulin beta 6 class V.
    
 
 0.800
TERT
Telomerase reverse transcriptase.
    
 0.775
TH
Tyrosine hydroxylase.
      
 0.761
PNCK
Pregnancy up-regulated nonubiquitous CaM kinase.
 
  
 
 0.744
LOC113198762
Tubulin beta-2 chain-like.
    
 
 0.743
TUBB
Tubulin beta class I.
    
 
 0.743
TUBB4B
Tubulin beta 4B class IVb.
    
 
 0.743
ENSUPAP00010013055
annotation not available
    
 
 0.743
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.