STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNN2Calponin 2. (306 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.906
CALML4
Calmodulin like 4.
   
 0.767
ENSUPAP00010004810
annotation not available
    
 0.764
ENSUPAP00010005591
annotation not available
    
 0.764
ENSUPAP00010010369
annotation not available
    
 0.764
TUBA1B
Tubulin alpha 1b.
    
 0.764
TUBA1C
Tubulin alpha 1c.
    
 0.764
TUBA4A
Tubulin alpha 4a.
    
 0.764
LOC113183851
Tubulin alpha-1D chain.
    
 0.764
TUBA3D
Tubulin alpha-3 chain.
    
 0.764
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.