STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRA2Ankyrin repeat family A member 2. (313 aa)    
Predicted Functional Partners:
CCDC8
Coiled-coil domain containing 8.
    
 0.995
HDAC4
Histone deacetylase 4.
   
 0.974
ENSUPAP00010011766
annotation not available
    
 0.973
RFXAP
Regulatory factor X associated protein.
    
 0.953
OBSL1
Obscurin like cytoskeletal adaptor 1.
    
 0.935
CUL7
Cullin 7.
    
  0.935
FBXW8
F-box and WD repeat domain containing 8.
    
 0.929
LRP4
LDL receptor related protein 4.
    
 0.886
HDAC5
Histone deacetylase 5.
   
 0.858
RFX5
Regulatory factor X5.
    
 0.828
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.