STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD68CD68 molecule. (330 aa)    
Predicted Functional Partners:
Lamp3
Lysosomal associated membrane protein 3.
   
 
0.835
LAMP1
Lysosomal associated membrane protein 1.
     
0.830
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.746
MCCC1
methylcrotonoyl-CoA carboxylase 1.
    
  0.738
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.736
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 
 0.736
NPRL3
NPR3 like, GATOR1 complex subunit.
    
 
 0.727
WDR24
WD repeat domain 24.
    
 
 0.719
WDR59
WD repeat domain 59.
    
 
 0.717
ENSUPAP00010025155
annotation not available
    
 
 0.717
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.