STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD1methyl-CpG binding domain protein 1. (620 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
 0.866
CFAP45
Cilia and flagella associated protein 45.
   
 0.847
TEKT2
Tektin 2.
   
 
 0.844
MNS1
Meiosis specific nuclear structural 1.
   
 0.840
TEKT3
Tektin 3.
   
 
 0.819
EFHC2
EF-hand domain containing 2.
   
 
 0.816
RIBC2
RIB43A domain with coiled-coils 2.
    
  0.814
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.814
TEKT1
Tektin 1.
    
 
 0.810
C1orf194
Chromosome unknown C1orf194 homolog.
   
   0.809
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.