STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010019709annotation not available (396 aa)    
Predicted Functional Partners:
UXS1
UDP-glucuronate decarboxylase 1.
     
 0.897
IMPA1
Inositol monophosphatase 1.
     
 0.819
IMPA2
Inositol monophosphatase 2.
     
 0.819
MRPS6
Mitochondrial ribosomal protein S6.
    
 
 0.795
MRPL33
Mitochondrial ribosomal protein L33.
    
   0.699
ENSUPAP00010008412
annotation not available
    
   0.699
MRPL43
Mitochondrial ribosomal protein L43.
    
   0.699
ENSUPAP00010014290
annotation not available
    
   0.699
MRPL41
Mitochondrial ribosomal protein L41.
    
   0.699
MRPL20
Mitochondrial ribosomal protein L20.
    
   0.699
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.