STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD52Ankyrin repeat domain 52. (1076 aa)    
Predicted Functional Partners:
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.918
RNF146
Ring finger protein 146.
    
 0.894
AXIN2
Axin 2.
    
 0.865
AXIN1
Axin 1.
    
 0.865
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
    
 0.865
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.821
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.821
SPTBN2
Spectrin beta, non-erythrocytic 2.
   
 0.792
SPTB
Spectrin beta, erythrocytic.
   
 0.792
SPTBN1
Spectrin beta, non-erythrocytic 1.
   
 0.792
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.