STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S100A12S100 calcium binding protein A12. (92 aa)    
Predicted Functional Partners:
S100A8
S100 calcium binding protein A8.
   
0.997
S100A9
S100 calcium binding protein A9.
  
 
0.916
AGER
Advanced glycosylation end-product specific receptor.
   
 0.861
ENSUPAP00010004255
annotation not available
    
  0.835
SLC11A1
Solute carrier family 11 member 1.
   
 
 0.828
AP2A2
Adaptor related protein complex 2 subunit alpha 2.
    
  0.827
TLR4
Toll like receptor 4.
   
 0.796
CAMP
Cathelicidin antimicrobial peptide.
   
 
 0.789
AP1B1
Adaptor related protein complex 1 subunit beta 1.
    
  0.772
AP2B1
Adaptor related protein complex 2 subunit beta 1.
    
  0.772
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.