STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA2Carbonic anhydrase 2. (302 aa)    
Predicted Functional Partners:
SLC4A1
Solute carrier family 4 member 1 (Diego blood group).
   
 
 0.832
ENSUPAP00010008711
annotation not available
   
 
 0.700
RPF2
Ribosome production factor 2 homolog.
   
 
 0.700
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.699
RPL11
Ribosomal protein L11.
    
 
 0.692
ENSUPAP00010002771
annotation not available
    
 
 0.660
Rpl5
Ribosomal protein L5.
    
 
 0.660
CA1
Carbonic anhydrase 1.
  
  
0.656
CA13
Carbonic anhydrase 13.
  
  
0.654
SLC4A4
Solute carrier family 4 member 4.
   
 
 0.649
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.