STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODF2Outer dense fiber of sperm tails 2. (829 aa)    
Predicted Functional Partners:
CEP164
Centrosomal protein 164.
    
 0.966
CEP83
Centrosomal protein 83.
    
 0.959
CEP170
Centrosomal protein 170.
    
 0.956
CEP128
Centrosomal protein 128.
    
 0.954
CCDC120
Coiled-coil domain containing 120.
    
 0.945
SCLT1
Sodium channel and clathrin linker 1.
   
 0.943
CCDC68
Coiled-coil domain containing 68.
    
 0.936
CEP89
Centrosomal protein 89.
     
 0.936
FBF1
Fas binding factor 1.
     
 0.934
CENPF
Centromere protein F.
     
 0.923
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.