STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPAL4NIPA like domain containing 4. (405 aa)    
Predicted Functional Partners:
UXS1
UDP-glucuronate decarboxylase 1.
   
 
 0.665
SLC27A4
Solute carrier family 27 member 4.
    
 
 0.586
CYP4F22
Cytochrome P450 4F22.
      
 0.558
TGM1
Transglutaminase 1.
      
 0.546
PNPLA1
Patatin like phospholipase domain containing 1.
      
 0.544
ALOXE3
Arachidonate lipoxygenase 3.
      
 0.544
GNG13
G protein subunit gamma 13.
      
 0.543
LIPN
Lipase family member N.
      
 0.543
HAPLN2
Hyaluronan and proteoglycan link protein 2.
      
 0.487
TUBGCP5
Tubulin gamma complex associated protein 5.
   
  
 0.485
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.