STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCDSarcoglycan delta. (289 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.983
SGCB
Sarcoglycan beta.
   
 0.977
SGCA
Sarcoglycan alpha.
   
 0.974
SGCE
Sarcoglycan epsilon.
   
 0.971
SSPN
Sarcospan.
   
 0.971
SGCG
Sarcoglycan gamma.
  
 
0.965
DMD
Dystrophin.
    
 0.959
UTRN
Utrophin.
    
 0.953
CAV3
Caveolin 3.
   
 
 0.953
NOS1AP
Nitric oxide synthase 1 adaptor protein.
     
 0.936
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.