STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010022996annotation not available (359 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
0.981
HOMER2
Homer scaffold protein 2.
    
0.962
GRM5
Glutamate metabotropic receptor 5.
    
 0.865
ENSUPAP00010008408
annotation not available
    
 0.865
GRM1
Glutamate metabotropic receptor 1.
    
 0.865
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.853
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.791
C1orf116
Chromosome unknown C1orf116 homolog.
    
   0.707
ENSUPAP00010019040
annotation not available
    
 0.697
DLGAP1
DLG associated protein 1.
    
 0.694
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.