STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP20Ubiquitin specific peptidase 20. (915 aa)    
Predicted Functional Partners:
ADRB2
Adrenoceptor beta 2.
    
 0.804
TRAF6
TNF receptor associated factor 6.
    
 0.788
ADRB1
Adrenoceptor beta 1.
    
 0.775
CCP110
Centriolar coiled-coil protein 110.
    
 0.769
HERC2
E3 ubiquitin-protein ligase HERC2.
   
 
 0.756
MRPS9
Mitochondrial ribosomal protein S9.
   
 
 0.743
LAP3
Leucine aminopeptidase 3.
    
 0.739
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.739
MRPS14
Mitochondrial ribosomal protein S14.
    
 0.738
MRPL11
Mitochondrial ribosomal protein L11.
    
 
 0.737
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.