STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF17Ring finger protein 17. (1570 aa)    
Predicted Functional Partners:
PIWIL1
Piwi like RNA-mediated gene silencing 1.
   
 0.898
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 0.878
PIWIL4
Piwi like RNA-mediated gene silencing 4.
   
 0.840
DICER1
Dicer 1, ribonuclease III.
  
 
 0.784
DHX9
DExH-box helicase 9.
   
 0.754
DDX6
DEAD-box helicase 6.
   
 0.722
KIFBP
Kinesin family binding protein.
   
 0.722
HABP4
Hyaluronan binding protein 4.
   
 0.706
SERBP1
SERPINE1 mRNA binding protein 1.
   
 0.706
DCP2
Decapping mRNA 2.
    
  0.697
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.