STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF263Zinc finger protein 263. (686 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.697
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.656
ENSUPAP00010015574
annotation not available
    
  0.649
ACAA2
acetyl-CoA acyltransferase 2.
   
 0.598
VARS1
valyl-tRNA synthetase 1.
    
 
 0.578
TRIM33
Tripartite motif containing 33.
    
 0.578
L3MBTL4
L3MBTL histone methyl-lysine binding protein 4.
    
 0.575
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.575
SCAND1
SCAN domain containing 1.
    
  
0.573
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.555
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.