STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ifnb1Interferon beta 1. (187 aa)    
Predicted Functional Partners:
IFNAR1
Interferon alpha and beta receptor subunit 1.
   
 0.992
IL10RB
Interleukin 10 receptor subunit beta.
   
 0.962
TP53BP2
Tumor protein p53 binding protein 2.
   
 0.951
ENSUPAP00010002332
annotation not available
   
 0.940
IFNGR1
Interferon gamma receptor 1.
  
 
 0.931
IFNG
Interferon gamma.
   
 
 0.925
IRF3
Interferon regulatory factor 3.
     
 0.919
IFNLR1
Interferon lambda receptor 1.
    
 0.916
IRF7
Interferon regulatory factor 7.
     
 0.915
JAK1
Janus kinase 1.
     
 0.902
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.