STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIPEPMitochondrial intermediate peptidase. (713 aa)    
Predicted Functional Partners:
NTS
Neurotensin.
    
 0.910
COPS3
COP9 signalosome subunit 3.
   
 
  0.807
COPS5
COP9 signalosome subunit 5.
   
 
 0.798
COPS4
COP9 signalosome subunit 4.
   
 
  0.797
COPS2
COP9 signalosome subunit 2.
   
 
  0.793
ENSUPAP00010015388
annotation not available
    
   0.755
Rims2
Regulating synaptic membrane exocytosis 2.
    
   0.755
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
   
 
 0.674
PITRM1
Pitrilysin metallopeptidase 1.
    
 
 0.650
FXN
Frataxin.
   
 
 0.639
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.