STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC1Polyhomeotic homolog 1. (1016 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.993
CBX7
Chromobox 7.
    
 0.991
CBX4
Chromobox 4.
    
 0.985
CBX6
Chromobox 6.
    
 0.984
RNF2
Ring finger protein 2.
    
 0.983
RING1
Ring finger protein 1.
    
 0.983
ENSUPAP00010006969
annotation not available
    
 0.982
PCGF2
Polycomb group ring finger 2.
    
 0.982
PCGF6
Polycomb group ring finger 6.
    
 0.963
PCGF5
Polycomb group ring finger 5.
    
 0.961
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.