STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010029313annotation not available (94 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
ENSUPAP00010020417
annotation not available
   
 0.999
RPS5
Ribosomal protein S5.
   
 0.996
ENSUPAP00010008553
annotation not available
   
 0.996
RPS15
Ribosomal protein S15.
   
 0.996
RPS10-NUDT3
RPS10-NUDT3 readthrough.
   
 0.996
RPS26
Ribosomal protein S26.
   
 0.996
Rps16
Ribosomal protein S16.
  
 0.996
RACK1
Receptor for activated C kinase 1.
   
 0.995
RSRC1
Arginine and serine rich coiled-coil 1.
   
 0.995
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.