STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF605Zinc finger protein 605. (590 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.656
ENSUPAP00010015574
annotation not available
    
  0.649
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.611
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.594
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.575
TRIM28
Tripartite motif containing 28.
    
 0.568
ENSUPAP00010013992
annotation not available
    
  0.549
MRPS10
Mitochondrial ribosomal protein S10.
   
  0.527
BARD1
BRCA1 associated RING domain 1.
    
 0.526
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  0.524
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.