STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HYKKHydroxylysine kinase. (376 aa)    
Predicted Functional Partners:
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase.
 0.986
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.885
CTH
Cystathionine gamma-lyase.
  
 
 0.872
AGXT2
Alanine--glyoxylate aminotransferase 2.
 
 0.854
AADAT
Aminoadipate aminotransferase.
  
 0.844
KMO
Kynurenine 3-monooxygenase.
   
 
 0.838
GCLM
Glutamate-cysteine ligase modifier subunit.
  
 
 0.837
KYNU
Kynureninase.
   
 
 0.834
TDO2
Tryptophan 2,3-dioxygenase.
  
 
 0.821
AFMID
Arylformamidase.
  
 
 0.818
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.