Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
uidA | uidB | b1617 | b1616 | beta-D-glucuronidase; Protein involved in carbohydrate catabolic process; Belongs to the glycosyl hydrolase 2 family. | Glucuronide permease; Protein involved in carbohydrate catabolic process. | 0.987 |
uidA | uidC | b1617 | b1615 | beta-D-glucuronidase; Protein involved in carbohydrate catabolic process; Belongs to the glycosyl hydrolase 2 family. | Putative outer membrane porin for beta-glucuronides porin protein; Enhances the activity of the UidB (GusB) glucuronide transporter, on its own however it has no transport activity. Glucuronide transport does not occur in strain K12 due to a variant at position 100 of the UidB (GusB, AC P0CE44, AC P0CE45) protein. | 0.913 |
uidA | uidR | b1617 | b1618 | beta-D-glucuronidase; Protein involved in carbohydrate catabolic process; Belongs to the glycosyl hydrolase 2 family. | Transcriptional repressor; Repressor for the uidRABC (gusRABC) operon. | 0.934 |
uidB | uidA | b1616 | b1617 | Glucuronide permease; Protein involved in carbohydrate catabolic process. | beta-D-glucuronidase; Protein involved in carbohydrate catabolic process; Belongs to the glycosyl hydrolase 2 family. | 0.987 |
uidB | uidC | b1616 | b1615 | Glucuronide permease; Protein involved in carbohydrate catabolic process. | Putative outer membrane porin for beta-glucuronides porin protein; Enhances the activity of the UidB (GusB) glucuronide transporter, on its own however it has no transport activity. Glucuronide transport does not occur in strain K12 due to a variant at position 100 of the UidB (GusB, AC P0CE44, AC P0CE45) protein. | 0.972 |
uidB | uidR | b1616 | b1618 | Glucuronide permease; Protein involved in carbohydrate catabolic process. | Transcriptional repressor; Repressor for the uidRABC (gusRABC) operon. | 0.461 |
uidC | uidA | b1615 | b1617 | Putative outer membrane porin for beta-glucuronides porin protein; Enhances the activity of the UidB (GusB) glucuronide transporter, on its own however it has no transport activity. Glucuronide transport does not occur in strain K12 due to a variant at position 100 of the UidB (GusB, AC P0CE44, AC P0CE45) protein. | beta-D-glucuronidase; Protein involved in carbohydrate catabolic process; Belongs to the glycosyl hydrolase 2 family. | 0.913 |
uidC | uidB | b1615 | b1616 | Putative outer membrane porin for beta-glucuronides porin protein; Enhances the activity of the UidB (GusB) glucuronide transporter, on its own however it has no transport activity. Glucuronide transport does not occur in strain K12 due to a variant at position 100 of the UidB (GusB, AC P0CE44, AC P0CE45) protein. | Glucuronide permease; Protein involved in carbohydrate catabolic process. | 0.972 |
uidR | uidA | b1618 | b1617 | Transcriptional repressor; Repressor for the uidRABC (gusRABC) operon. | beta-D-glucuronidase; Protein involved in carbohydrate catabolic process; Belongs to the glycosyl hydrolase 2 family. | 0.934 |
uidR | uidB | b1618 | b1616 | Transcriptional repressor; Repressor for the uidRABC (gusRABC) operon. | Glucuronide permease; Protein involved in carbohydrate catabolic process. | 0.461 |