Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rhaR | rhaS | b3906 | b3905 | Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose. | Transcriptional activator of rhaBAD and rhaT; Activates expression of the rhaBAD and rhaT operons. | 0.877 |
rhaR | rhaT | b3906 | b3907 | Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose. | L-rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Can also transport L-mannose and L-xylose, but at reduced rates. | 0.963 |
rhaS | rhaR | b3905 | b3906 | Transcriptional activator of rhaBAD and rhaT; Activates expression of the rhaBAD and rhaT operons. | Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.877 |
rhaS | rhaT | b3905 | b3907 | Transcriptional activator of rhaBAD and rhaT; Activates expression of the rhaBAD and rhaT operons. | L-rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Can also transport L-mannose and L-xylose, but at reduced rates. | 0.933 |
rhaT | rhaR | b3907 | b3906 | L-rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Can also transport L-mannose and L-xylose, but at reduced rates. | Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.963 |
rhaT | rhaS | b3907 | b3905 | L-rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Can also transport L-mannose and L-xylose, but at reduced rates. | Transcriptional activator of rhaBAD and rhaT; Activates expression of the rhaBAD and rhaT operons. | 0.933 |