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There are several matches for 'exbD1'.
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organism
protein
Acinetobacter calcoaceticus
exbD1
- annotation not available
Aeromonas salmonicida
exbD1
- annotation not available
Alcanivorax borkumensis
exbD1
- InterPro: Biopolymer transport protein ExbD/TolR; Specificity unclear
Alcanivorax dieselolei
exbD1
- annotation not available
Aliivibrio salmonicida
exbD1
- annotation not available
Arcobacter butzleri RM4018
exbD1
- Biopolymer transport protein ExbD; Pfam match to PF02472 ExbD, score 87.4, E-value 4.1E-023
Aromatoleum aromaticum
exbD1
- annotation not available
Azoarcus sp. BH72
exbD1
- Putative biopolymer transport protein ExbD. ExbD is part of the TonB-dependent transduction complex. The TonB complex uses the proton grandient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane. InterPro: Biopolymer transport protein ExbD/TolR Pfam: Biopolymer transport protein ExbD/TolR no signal peptide probable 1 TMH; Family membership
Bordetella avium
exbD1
- annotation not available
Bordetella trematum
exbD1
- annotation not available
Campylobacter coli 76339
exbD1
- annotation not available
Campylobacter fetus testudinum
exbD1
- Biopolymer transporter ExbD; Pfam match to PF02472.11 ExbD
Campylobacter jejuni NCTC11168
exbD1
- Biopolymer transport protein; Original (2000) note: Cj0180,
exbD1
, biopolymer transport protein, len: 136 aa; highly similar to e.g. EXBD_ECOLI biopolymer transport exbD protein (141 aa),fasta scores; opt: 356 z-score: 629.2 E(): 8.7e-28, 42.9% identity in 119 aa overlap. No Hp ortholog; Updated (2006) note: Pfam domain PF02472 Biopolymer transport protein ExbD/TolR identified within CDS. Also,one probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Characterised within Escherichia coli with acceptable identity scores. Thus, putative not adde [...]
Campylobacter lari
exbD1
- TonB system transport protein ExbD; Pfam match to PF02472.7 ExbD
Campylobacter sp. 1485E
exbD1
- TonB system transport protein ExbD; Pfam match to PF02472.11 ExbD
Cellvibrio japonicus
exbD1
- ExbD; Identified by match to protein family HMM PF02472
Chromobacterium violaceum
exbD1
- Biopolymer transport exbD transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0848
Collimonas fungivorans
exbD1
- annotation not available
Corallococcus coralloides
exbD1
- annotation not available
Cupriavidus metallidurans
exbD1
- annotation not available
Cupriavidus taiwanensis
exbD1
- BIOPOLYMER TRANSPORT PROTEIN; Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter
Flavobacterium branchiophilum
exbD1
- 1.2 Transport/binding proteins and lipoproteins
Flavobacterium indicum
exbD1
- annotation not available
Flavobacterium psychrophilum
exbD1
- annotation not available
Gammaproteobacteria bacterium HdN1
exbD1
- Biopolymer transport protein ExbD/TolR; silverDB:HdN1F4420
Gluconacetobacter diazotrophicus
exbD1
- annotation not available
Herminiimonas arsenicoxydans
exbD1
- Biopolymer transport protein
exbD1
; Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter
Janthinobacterium lividum
exbD1
- annotation not available
Janthinobacterium sp. HH01
exbD1
- annotation not available
Janthinobacterium sp. Marseille
exbD1
- annotation not available
Massilia sp. LC238
exbD1
- annotation not available
Nitrosomonas europaea
exbD1
- Biopolymer transport protein ExbD/TolR; InterPro IPR003400 COGs COG0848
Photobacterium profundum
EXBD1
- annotation not available
Pseudomonas protegens CHA0
exbD1
- annotation not available
Pseudomonas protegens Pf5
exbD1
- TonB system transport protein
ExbD1
; Identified by match to protein family HMM PF02472; match to protein family HMM TIGR02803
Pseudomonas pseudoalcaligenes CECT5344
exbD1
- Biopolymer transport protein
Pseudomonas stutzeri A1501
exbD1
- TonB system transport protein; Code: U; COG: COG0848
Pseudomonas syringae phaseolicola
exbD1
- TonB system transport protein
ExbD1
; Identified by match to protein family HMM PF02472
Ralstonia eutropha H16
exbD1
- Biopolymer transport protein; Intracellular trafficking and secretion
Ralstonia solanacearum GMI1000
exbD1
- Probable biopolymer transport transmembrane protein; Cell processes; transport of small molecules
Rhodobacter capsulatus
exbD1
- annotation not available
Rhodopseudomonas palustris CGA009
exbD1
- Biopolymer transport protein ExbD; InterPro IPR003400 COGs COG0848
Rhodospirillum centenum
exbD1
- Biopolymer transport
exbD1
protein, putative; Identified by match to protein family HMM PF00529 match to protein family HMM TIGR01730
Riemerella anatipestifer
exbD1
- Flagellar motor protein MotA; Biopolymer transport protein
Shewanella violacea
exbD1
- annotation not available
Solemya velum
exbD1
- annotation not available
Stenotrophomonas maltophilia K279a
exbD1
- Putative biopolymer transport
ExbD1
protein; Similarity:fasta; with=UniProt:O34259 (EMBL:AE012094); Xanthomonas campestris pv. campestris;
exbD1
; Biopolymer transport
exbD1
protein.; length=140; id 89.362%; ungapped id 90.000%; E()=8.1e-45; 141 aa overlap; query 1-141; subject 1-140; similarity:fasta; with=UniProt:Q4V0R9 (EMBL:CP000050); Xanthomonas campestris pv. campestris (strain 8004).; Biopolymer transport
ExbD1
protein.; length=140; id 89.362%; ungapped id 90.000%; E()=8.1e-45; 141 aa overlap; query 1-141; subject 1-140
Vibrio anguillarum
exbD1
- TolR; User locus_tag: VANGcI1435
Vibrio cholerae O1
exbD1
- Biopolymer transport protein
exbD1
; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates
Vibrio cholerae O395
exbD1
- annotation not available
Vibrio fischeri
exbD1
- annotation not available
Xanthomonas albilineans
exbD1
- Probable biopolymer transport exbd transmembrane protein; Transport go:0005215 go:0006810; tonb family of auxiliary proteins for energization of omr-mediated transport
Xanthomonas axonopodis citri
exbD1
- Biopolymer transport
ExbD1
protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark
Xanthomonas campestris campestris
exbD1
- Biopolymer transport protein
exbD1
; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates
Xanthomonas campestris vesicatoria
exbD1
- annotation not available
Xanthomonas fuscans
exbD1
- annotation not available
Xanthomonas hortorum
exbD1
- annotation not available
Pseudomonas aeruginosa
exbD - annotation not available
[a.k.a. CGU42_30115, AOY09_06300, CAZ10_16215,
exbD1
]
Rhodospirillum photometricum
CCG08385.1 - annotation not available
[a.k.a.
exbD1
, RSPPHO_01759, 378403269]
Rhodospirillum photometricum
CCG08386.1 - annotation not available
[a.k.a.
exbD1
, RSPPHO_01760, H6SK71_PARPM]
Aeromonas hydrophila ATCC7966
AHA_1985 - Biopolymer transport
exbD1
protein; Identified by match to protein family HMM PF02472
[a.k.a. ABK39801.1, GI:117562853, Biopolymer transport
exbD1
protein]
Azoarcus sp. BH72
exbD3 - Probable fiopolymer transport protein ExbD. Homology to
exbD1
of X. campestris of 43%. ExbD is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane. InterPro: Biopolymer transport protein ExbD/TolR Pfam: Biopolymer transport protein ExbD/TolR no signal peptide probable 1 TMH; High confidence in function and specificity
[a.k.a. azo0613, CAL93230.1, WP_011764348.1]
Azoarcus sp. BH72
exbD6 - Putative biopolymer transport protein. Homology to
exbD1
of X. campestris of 31%. ExbD is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane. InterPro: Biopolymer transport protein ExbD/TolR Pfam: Biopolymer transport protein ExbD/TolR no signal peptide probable 1 TMH; Family membership
[a.k.a. azo2332, CAL94949.1, CAL94949]
Burkholderia pseudomallei K96243
BPSL2939 - Putative transport-related membrane protein; Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 biopolymer transport ExbD protein or b3005 or c3740 or z4358 or ecs3889 SWALL:EXBD_ECOLI (SWALL:P18784) (141 aa) fasta scores: E(): 2.6e-06, 33.87% id in 124 aa, and to Xanthomonas campestris biopolymer transport
ExbD1
protein or xcc0010 SWALL:EXB1_XANCP (SWALL:O34259) (140 aa) fasta scores: E(): 4.3e-11, 44.11% id in 136 aa. Note: This CDS is longer in its -terminal region than most of its database matches
[a.k.a. CAH36949.1, GOA:Q63QT5, UniProtKB/TrEMBL:Q63QT5]
Burkholderia pseudomallei K96243
BPSS0366 - Similar to Xanthomonas campestris biopolymer transport protein
ExbD1
or xcc0010 SWALL:EXB1_XANCP (SWALL:O34259) (140 aa) fasta scores: E(): 4.8e-18, 43.18% id in 132 aa, and to Ralstonia solanacearum probable biopolymer transport transmembrane protein rsc1965 or rs03539 SWALL:Q8XXZ8 (EMBL:AL646067) (137 aa) fasta scores: E(): 4.7e-30, 61.76% id in 136 aa
[a.k.a. CAH37814.1, WP_004188495.1, bps:BPSS0366]
Campylobacter jejuni NCTC11168
tonB1 - TonB transport protein; Original (2000) note: Cj0181, tonB1, possible tonB transport protein, len 248 aa; similar to e.g. TONB_PSEPU tonB protein (243 aa), fasta scores; opt: 220 z-score: 317.2 E(): 2.1e-10, 29.5% identity in 149 aa overlap. No Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Characterised within Pseudomonas putida with marginal identity score. Putative not added. Cj0179-Cj0181 (exbB1,
exbD1
, tonB1) function as an outer-membrane energy transducer system. Functional classification - Transport/binding proteins - Other; PMID:7642501 [...]
[a.k.a. Cj0181, CAL34350.1, TonB transport protein]
Chlamydophila abortus
exbD - Similar to Escherichia coli biopolymer transport ExbD protein SWALL:EXBD_ECOLI (SWALL:P18784) (141 aa) fasta scores: E(): 0.00012, 26.35% id in 129 aa, and to Chlamydia trachomatis biopolymer transport protein ExbD or ct597 SWALL:O84602 (EMBL:AE001330) (135 aa) fasta scores: E(): 2.3e-33, 68.14% id in 135 aa, and to Xanthomonas campestris biopolymer transport
ExbD1
protein or Xcc0010 SWALL:EXB1_XANCP (SWALL:O34259) (140 aa) fasta scores: E(): 4.3e-06, 32.54% id in 126 aa
[a.k.a. CAB942, CAH64381.1, UniProtKB/TrEMBL:Q5L4R5]
Dinoroseobacter shibae
exbD - PFAM: Biopolymer transport protein ExbD/TolR; low swissprot hit to Biopolymer transport protein
exbD1
from Vibrio cholerae; low gb hit to Biopolymer transport protein ExbD/TolR [alpha proteobacterium BAL199]
[a.k.a. Dshi_0568, ABV92314.1, GI:157910881]
Hyphomonas adhaerens
HAD_17216 - TonB system transport protein
ExbD1
; COG0848 Biopolymer transport protein
[a.k.a. KCZ82588.1, A0A069E4V9, WP_035574075.1]
Oceanimonas sp. GK1
GU3_13835 - TonB system transport protein
ExbD1
; COG0848 Biopolymer transport protein
[a.k.a. AEY02520.1, H2FTG2, WP_014293227.1]
Pectobacterium atrosepticum
ECA4298 - Similar to Neisseria meningitidis biopolymer transport ExbD protein ExbD or nma1983 or nmb1728 SWALL:EXBD_NEIMA (SWALL:P95376) (144 aa) fasta scores: E(): 3.9e-13, 38.57% id in 140 aa, and to Pseudomonas aeruginosa ExbD or
ExbD1
or pa0199 SWALL:Q9RMT1 (EMBL:AF190125) (133 aa) fasta scores: E(): 1.8e-24, 55.63% id in 133 aa
[a.k.a. CAG77195.1, 49613744, GOA:Q6CZ55]
Rhodopirellula baltica
RB10702 - Similar to biopolymer transport exbD2 protein; PMID: 9781885 best DB hits: BLAST: pir:E82726; conserved hypothetical protein XF1080 [imported] -; E=0.007 swissprot:Q9ZHV9; EXD2_VIBCH BIOPOLYMER TRANSPORT EXBD2 PROTEIN; E=0.043 pir:B82858; biopolymer transport
ExbD1
protein XF0011 [imported] -; E=0.16 COG: XF1080; COG0848 Biopolymer transport protein; E=7e-04 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=5.3e-06
[a.k.a. NP_869567.1, GI:32476573, WP_007324222.1]
Ricinus communis
XP_002534643.1 - Biopolymer transport
exbD1
protein, putative; Encoded by transcript RCOM_0032000A
[a.k.a. RCOM_0032000, XP_002534643.1, rcu:8287985]
Shewanella putrefaciens
ABP74692.1 - PFAM: Biopolymer transport protein ExbD/TolR; KEGG: son:SO3672 TonB system transport protein
ExbD1
[a.k.a. Sputcn32_0963, A4Y409, InterPro:IPR003400]
Shewanella sp. ANA3
ABK49462.1 - PFAM: Biopolymer transport protein ExbD/TolR; KEGG: son:SO3672 TonB system transport protein
ExbD1
[a.k.a. Shewana3_3238, InterPro:IPR003400, Biopolymer transport protein ExbD/TolR]
Stenotrophomonas maltophilia R5513
Smal_0010 - PFAM: Biopolymer transport protein ExbD/TolR; KEGG: xcb:XC_0010 biopolymer transport
ExbD1
protein
[a.k.a. ACF49715.1, ACF49715, InterPro:IPR003400]
Vibrio alginolyticus 40B
VMC_16010 - TonB system transport protein
ExbD1
; Identified by sequence similarity; putative
[a.k.a. EEZ83472.1, 29869466, 269829228]
Vibrio brasiliensis
EGA64650.1 - TonB system transport protein
ExbD1
; COG0848 Biopolymer transport protein
[a.k.a. VIBR0546_07257, WP_006880581.1, E8LX95_9VIBR]
Vibrio nigripulchritudo
CCO48768.1 - TonB system transport protein
ExbD1
; Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter
[a.k.a. VIBNI_A2349, VIBNISOn1_600077, 549024720]
Vibrio scophthalmi
EGU35397.1 - TonB system transport protein
ExbD1
; COG0848 Biopolymer transport protein
[a.k.a. VIS19158_19327, 342799847, vsc:VSVS12_01177]
Vibrio sinaloensis
EGA71171.1 - TonB system transport protein
ExbD1
; COG0848 Biopolymer transport protein
[a.k.a. VISI1226_06603, E8M4D3, WP_008075120.1]
Vibrio sp. N418
EGU29463.1 - TonB system transport protein
ExbD1
; COG0848 Biopolymer transport protein
[a.k.a. VIBRN418_14616, GI:342793673, F9RHL5]
Xylella fastidiosa 9a5c
XF_0011 - Biopolymer transport
ExbD1
protein; Similar to SP|O34259 (percent identity: 78 %/query alignment coverage: 100.0 %/subject alignment coverage: 100.0 %); identified by sequence similarity; putative; ORF located using Glimmer/RBSfinder
[a.k.a. AAF82824.1, WP_010892560.1, xfa:XF_0011]