STRING: functional protein association networks

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455 matches

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organism

protein

Spirochaeta smaragdinae

Spirs_1483 - ABC transporter related protein; COGs: COG4172 ABC-type uncharacterized transport system duplicated ATPase component; InterPro IPR017871:IPR003439:IPR013563:IPR003593; KEGG: pae:PA1807 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Probable ATP-binding component of ABC transporter; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; Belongs to the ABC transporter superfamily [a.k.a. ADK80610.1, ADK80610, ABC transporter related protein]

Azoarcus sp. BH72

azo0972 - Probable ABC transporter, ATP-binding protein; Thiamine transport ATP-binding protein thiQ. PART OF THE BINDING-PROTEIN-DEPENDENT TRANSPORT SYSTEM TBPA-THIPQ FOR THIAMINE AND TPP. PROBABLY RESPONSIBLE FOR ENERGY COUPLING TO THE TRANSPORT SYSTEM. TREMBL:Q7WH56: 84% identity, 92% similarity Description:putative abc-transporter atp-binding component InterPro: IPR003593; AAA_ATPase. IPR003439; ABC_transporter. Pfam:PF00005; ABC_tran; ProDom PD000006; ABC_transporter; 1. SMART SM00382; AAA recf: DNA replication and repair protein NO transmembrane helices; Function unclear [a.k.a. CAL93589.1, Probable ABC transporter, ATP-binding protein, InterPro:IPR003439]

Ferrimonas balearica

Fbal_2986 - Nucleoside ABC transporter ATP-binding protein; COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439: IPR003593: IPR017871; KEGG: sse:Ssed_3586 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A0NS68 Probable sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter [a.k.a. ADN77188.1, nucleoside ABC transporter ATP-binding protein, WP_013346494.1]

Stenotrophomonas maltophilia K279a

cydC - Putative transmembrane ABC transporter ATP-binding protein, cytochrome related; Similarity:fasta; BAV3107; bavium; ABC transporter, ATP-binding protein; length 549 aa; id=43.3%; E()=6.8e-54; 550 aa overlap; query 8-553 aa; subject 5-548 aa; similarity:fasta; BPP4021; bparapertussis; probable ATP-binding component of ABC transporter; length 559 aa; id=43.1%; E()=4.8e-49; 554 aa overlap; query 11-557 aa; subject 10-557 aa; similarity:fasta; BP0263; bpertussis; probable ATP-binding component of ABC transporter; length 559 aa; id=42.5%; E()=3.6e-48; 553 aa overlap; query 11-557 aa; subject [...] [a.k.a. Smlt3279, CAQ46718.1, 190013086]

Stenotrophomonas maltophilia K279a

cydD - Putative ABC transporter ATP-binding protein, cytochrome related; Similarity:fasta; BAV3108; bavium; ABC transporter, ATP-binding protein; length 579 aa; id=46.3%; E()=3.1e-60; 562 aa overlap; query 24-572 aa; subject 22-576 aa; similarity:fasta; BB4495; bbronchiseptica; probable ATP-binding component of ABC transporter; length 583 aa; id=46.4%; E()=8.2e-53; 582 aa overlap; query 13-576 aa; subject 11-583 aa; similarity:fasta; BPP4022; bparapertussis; probable ATP-binding component of ABC transporter; length 583 aa; id=46.4%; E()=5.7e-53; 582 aa overlap; query 13-576 aa; subject 11-583 [...] [a.k.a. Smlt3280, CAQ46719.1, IPR011527]

Intrasporangium calvum

Intca_3036 - Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: hvo:HVO_A0579 ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids); PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids); PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter [a.k.a. ADU49525.1, ADU49525, E6SBY5_INTC7]

Truepera radiovictrix

Trad_0159 - Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR003439:IPR010066:IPR013563:IPR003593:IPR 017871; KEGG: rec:RHECIAT_PA0000147 probable oligopeptide ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Q2CJI7 Oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-termi [...] [a.k.a. ADI13301.1, D7CXU1_TRURR, D7CXU1]

Marivirga tractuosa

Ftrac_2284 - ABC transporter related protein; COGs: COG4181 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: rbi:RB2501_11622 probable ATP-binding component of ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter [a.k.a. ADR22263.1, mtt:Ftrac_2284, E4TKW0_MARTH]

Ferrimonas balearica

Fbal_1284 - ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: asa:ASA_3513 peptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A3K932 Probable ATP-binding component of ABC transporter; PFAM: ABC transporter [a.k.a. ADN75490.1, ABC transporter related protein, WP_013344796.1]

10)

Syntrophobotulus glycolicus

Sgly_1114 - Amino acid ABC transporter ATP-binding protein, PAAT family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: lsp:Bsph_4684 amino-acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable amino-acid ABC transporter ATP-binding protein; PFAM: ABC transporter [a.k.a. ADY55439.1, 324964660, ADY55439]

11)

Niastella koreensis

Niako_1306 - Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: pgn:PGN_1330 probable branched chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable branched chain amino acid ABC transporter ATP-binding protein; manually curated [a.k.a. AEV97677.1, InterPro:IPR003439, IPR003439]

12)

Rhodopirellula baltica

mntA - PMID: 7743991 best DB hits: BLAST: pir:C69992; ABC transporter (ATP-binding protein) homolog ytgB -; E=3e-73 pir:A71357; probable ABC transporter ATP-binding protein (troB) -; E=1e-70 pir:T45470; ATP-binding ABC transport protein [imported] -; E=9e-58 COG: BS_ytgB; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=3e-74 BS_yfmF; COG1120 ABC-type cobalamin/Fe3+-siderophores transport; E=8e-24 PH1653; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=5e-23 PFAM: PF02463; SMC domain N terminal domain; E=0.17 PF00005; ABC transporter; E=7.9e-50 [a.k.a. RB12438, NP_870510.1, 32477516]

13)

Halanaerobium praevalens

Hprae_1196 - ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593:IPR017871; KEGG: mac:MA3919 iron ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Probable ABC transporter, ATP-binding protein; PFAM: ABC transporter [a.k.a. ADO77334.1, EC 3.6.3.34, WP_014553361.1]

14)

Truepera radiovictrix

Trad_0753 - ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cvi:CV_4397 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q7NPU5 Probable ABC transporter, ATP-binding protein; PFAM: ABC transporter [a.k.a. ADI13888.1, ADI13888, 297164177]

15)

Yersinia enterocolitica 8081

YE1248 - ABC transporter, ATP-binding component; Similar to many membrane transport proteins including:Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa3212 SWALL:Q9HZ28 (EMBL:AE004744) (264 aa) fasta scores: E(): 3.5e-67,80.69 38d in 259 aa and Rhizobium meliloti putative ABC transporter ATP-binding protein R01832 or Smc00175 SWALL:Q92PD6 (EMBL:AL591788) (269 aa) fasta scores: E(): 2.5e-42, 53.62 38d in 248 aa [a.k.a. CAL11340.1, A1JLJ1, YP_001005571.1]

16)

Rhodopirellula baltica

ybiT - Best DB hits: BLAST: swissprot:P75790; YBIT_ECOLI HYPOTHETICAL ABC TRANSPORTER; E=1e-60 pir:D83399; probable ATP-binding component of ABC transporter PA1964; E=2e-60 swissprot:O05519; YDIF_BACSU HYPOTHETICAL ABC TRANSPORTER; E=2e-60 COG: ybiT; COG0488 ATPase components of ABC transporters with duplicated; E=1e-61 PA1964; COG0488 ATPase components of ABC transporters with; E=2e-61 yheS; COG0488 ATPase components of ABC transporters with duplicated; E=2e-52 PFAM: PF00005; ABC transporter; E=4.7e-40 PF00006; ATP synthase alpha/beta family; E=0.83 PF00005; ABC transporter; E=8.7e-34 [a.k.a. RB9076, NP_868693.1, ABC transporter ATP-binding protein]

17)

Methylobacterium radiotolerans

ACB23441.1 - KEGG: mlo:mll0758 probable ATP-binding component of ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; SMART: AAA ATPase [a.k.a. Mrad2831_1446, B1M4I2, 170654386]

18)

Methylobacterium sp. 446

M446_2617 - KEGG: mlo:mll0758 probable ATP-binding component of ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; SMART: AAA ATPase [a.k.a. ACA17056.1, met:M446_2617, urea ABC transporter, ATP-binding protein UrtD]

19)

Pectobacterium atrosepticum

ECA1525 - ABC transporter ATP-binding protein; Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa2308 SWALL:Q9I1G7 (EMBL:AE004657) (282 aa) fasta scores: E(): 2.2e-67, 75.61% id in 246 aa, and to Xanthomonas campestris ABC transporter ATP-binding component nrtcd or xcc0773 SWALL:Q8PCG1 (EMBL:AE012177) (279 aa) fasta scores: E(): 1.8e-64, 70.91% id in 251 aa [a.k.a. CAG74431.1, CAG74431, GOA:Q6D704]

20)

Streptomyces coelicolor

SCO3824 - SCGD3.25, probable ABC-transporter ATP-binding component, len: 342 aa; may be involved in antibiotic resistance by acting as an efflux pump, highly similar to to many ABC-tranporter ATP-binding components (especially those involved in antibiotic transport) e.g. TR:O86916 (EMBL:Y15759) Streptomyces rochei ABC-tranporter which induces multidrug resistance (363 aa), fasta scores; opt: 1635 z-score: 1717.7 E(): 0, 77.6% identity in 340 aa overlap. Similar to many from S.coelicolor e.g. (EMBL:AL049841), SCE9.25c, S.coelicolor probable ABC transporter ATP-binding component (315 aa) (53.2% id [...] [a.k.a. SCGD3.25, NP_628013.1, 21222234]

455 matches

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