Organism Overview: Ruthia magnifica


 
dnaA protein networkhttps://string-db.org/network/413404.Rmag_0001Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
Rmag_0002 protein networkhttps://string-db.org/network/413404.Rmag_0002DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...]
gyrB protein networkhttps://string-db.org/network/413404.Rmag_0003DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
Rmag_0004 protein networkhttps://string-db.org/network/413404.Rmag_0004PFAM: phosphoribulokinase/uridine kinase; KEGG: tbd:Tbd_2447 phosphoribulokinase.
leuS protein networkhttps://string-db.org/network/413404.Rmag_0005TIGRFAM: leucyl-tRNA synthetase; KEGG: noc:Noc_2665 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
pyrD protein networkhttps://string-db.org/network/413404.Rmag_0006Dihydroorotate oxidase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
bioD protein networkhttps://string-db.org/network/413404.Rmag_0007Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an urei [...]
Rmag_0008 protein networkhttps://string-db.org/network/413404.Rmag_0008PFAM: Glutathione S-transferase, N-terminal domain; KEGG: hch:HCH_05897 glutathione S-transferase.
Rmag_0009 protein networkhttps://string-db.org/network/413404.Rmag_0009KEGG: lpf:lpl2631 ubiquinol-cytochrome c reductase cytochrome c1 subunit.
Rmag_0010 protein networkhttps://string-db.org/network/413404.Rmag_0010Cytochrome b/b6, N-terminal domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemi [...]
Rmag_0011 protein networkhttps://string-db.org/network/413404.Rmag_0011Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that genera [...]
Rmag_0012 protein networkhttps://string-db.org/network/413404.Rmag_0012Hypothetical protein.
secA protein networkhttps://string-db.org/network/413404.Rmag_0013Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the [...]
anmK protein networkhttps://string-db.org/network/413404.Rmag_0014Protein of unknown function UPF0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating Mur [...]
pyrC protein networkhttps://string-db.org/network/413404.Rmag_0015Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
Rmag_0016 protein networkhttps://string-db.org/network/413404.Rmag_0016TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: son:SO3533 riboflavin biosynthesis protein RibF; Belongs to the ribF family.
Rmag_0018 protein networkhttps://string-db.org/network/413404.Rmag_0018PFAM: homoserine O-succinyltransferase; KEGG: noc:Noc_2703 hypothetical protein.
Rmag_0019 protein networkhttps://string-db.org/network/413404.Rmag_0019KEGG: noc:Noc_2702 hypothetical protein.
Rmag_0020 protein networkhttps://string-db.org/network/413404.Rmag_0020PFAM: aminotransferase, class I and II; KEGG: hch:HCH_01778 aspartate/tyrosine/aromatic aminotransferase.
Rmag_0021 protein networkhttps://string-db.org/network/413404.Rmag_0021PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: tbd:Tbd_2152 peptidyl-prolyl cis-trans isomerase.
Rmag_0022 protein networkhttps://string-db.org/network/413404.Rmag_0022KEGG: pha:PSHAa0339 hypothetical protein.
purC protein networkhttps://string-db.org/network/413404.Rmag_0023KEGG: tcx:Tcr_0262 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase.
Rmag_0024 protein networkhttps://string-db.org/network/413404.Rmag_0024PFAM: peptidase M23B; KEGG: pae:PA0667 hypothetical protein.
dxr protein networkhttps://string-db.org/network/413404.Rmag_00251-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...]
Rmag_0026 protein networkhttps://string-db.org/network/413404.Rmag_0026PFAM: phosphatidate cytidylyltransferase; KEGG: cps:CPS_1558 phosphatidate cytidylyltransferase; Belongs to the CDS family.
uppS protein networkhttps://string-db.org/network/413404.Rmag_0027Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,3 [...]
hisF protein networkhttps://string-db.org/network/413404.Rmag_0028Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that prod [...]
Rmag_0029 protein networkhttps://string-db.org/network/413404.Rmag_0029KEGG: neu:NE1011 putative transmembrane protein.
cyoE protein networkhttps://string-db.org/network/413404.Rmag_0030Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
Rmag_0031 protein networkhttps://string-db.org/network/413404.Rmag_0031Hypothetical protein.
Rmag_0032 protein networkhttps://string-db.org/network/413404.Rmag_0032PFAM: cytochrome oxidase assembly; KEGG: noc:Noc_3040 cytochrome oxidase assembly.
Rmag_0033 protein networkhttps://string-db.org/network/413404.Rmag_0033KEGG: cvi:CV3790 hypothetical protein.
Rmag_0034 protein networkhttps://string-db.org/network/413404.Rmag_0034Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed b [...]
Rmag_0035 protein networkhttps://string-db.org/network/413404.Rmag_0035Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. [...]
Rmag_0036 protein networkhttps://string-db.org/network/413404.Rmag_0036PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: mca:MCA0882 cytochrome c oxidase assembly protein, putative.
Rmag_0037 protein networkhttps://string-db.org/network/413404.Rmag_0037PFAM: cytochrome c oxidase, subunit III; KEGG: hch:HCH_00049 cytochrome-c oxidase, subnunit III.
Rmag_0038 protein networkhttps://string-db.org/network/413404.Rmag_0038KEGG: mca:MCA0131 hypothetical protein.
Rmag_0039 protein networkhttps://string-db.org/network/413404.Rmag_0039TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: tcx:Tcr_1965 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory o [...]
Rmag_0040 protein networkhttps://string-db.org/network/413404.Rmag_0040TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: tcx:Tcr_1964 cytochrome c oxidase, cbb3-type, subunit II.
Rmag_0041 protein networkhttps://string-db.org/network/413404.Rmag_0041Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
Rmag_0042 protein networkhttps://string-db.org/network/413404.Rmag_0042Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the re [...]
Rmag_0043 protein networkhttps://string-db.org/network/413404.Rmag_0043DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; KEGG: sde:Sde_1693 cell division protein FtsK.
Rmag_0044 protein networkhttps://string-db.org/network/413404.Rmag_0044TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tcx:Tcr_0763 thioredoxin reductase.
pyrB protein networkhttps://string-db.org/network/413404.Rmag_0045TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: nmu:Nm [...]
Rmag_0046 protein networkhttps://string-db.org/network/413404.Rmag_0046Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
Rmag_0047 protein networkhttps://string-db.org/network/413404.Rmag_0047TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sat:SYN_02632 membrane-bound lytic murein transglycosylase B.
Rmag_0048 protein networkhttps://string-db.org/network/413404.Rmag_0048ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Be [...]
gshB protein networkhttps://string-db.org/network/413404.Rmag_0051KEGG: tcx:Tcr_1825 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; Belong [...]
rimP protein networkhttps://string-db.org/network/413404.Rmag_0052Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
nusA protein networkhttps://string-db.org/network/413404.Rmag_0053NusA antitermination factor; Participates in both transcription termination and antitermination.
infB protein networkhttps://string-db.org/network/413404.Rmag_0054Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes [...]
rbfA protein networkhttps://string-db.org/network/413404.Rmag_0055Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
truB protein networkhttps://string-db.org/network/413404.Rmag_0056tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
purD protein networkhttps://string-db.org/network/413404.Rmag_0057KEGG: vpa:VP2898 phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; Belongs to the GARS family.
Rmag_0058 protein networkhttps://string-db.org/network/413404.Rmag_0058Periplasmic or secreted lipoprotein-like protein; KEGG: neu:NE1008 hypothetical protein.
rsmI protein networkhttps://string-db.org/network/413404.Rmag_0059Protein of unknown function UPF0011; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
coaE protein networkhttps://string-db.org/network/413404.Rmag_0061dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
Rmag_0062 protein networkhttps://string-db.org/network/413404.Rmag_0062Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
Rmag_0063 protein networkhttps://string-db.org/network/413404.Rmag_0063TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: tbd:Tbd_0160 glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyc [...]
pgk protein networkhttps://string-db.org/network/413404.Rmag_0065PFAM: phosphoglycerate kinase; KEGG: ilo:IL2212 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
Rmag_0066 protein networkhttps://string-db.org/network/413404.Rmag_0066PFAM: pyruvate kinase; KEGG: vpa:VP2039 pyruvate kinase II; Belongs to the pyruvate kinase family.
Rmag_0067 protein networkhttps://string-db.org/network/413404.Rmag_0067Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphat [...]
mnmG protein networkhttps://string-db.org/network/413404.Rmag_0068Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s( [...]
rsmG protein networkhttps://string-db.org/network/413404.Rmag_006916S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
Rmag_0070 protein networkhttps://string-db.org/network/413404.Rmag_0070KEGG: sde:Sde_1913 hypothetical protein.
Rmag_0071 protein networkhttps://string-db.org/network/413404.Rmag_0071TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rso:RSc1787 putative deoxyribonuclease.
Rmag_0072 protein networkhttps://string-db.org/network/413404.Rmag_0072Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
ubiA protein networkhttps://string-db.org/network/413404.Rmag_00734-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubi [...]
dapD protein networkhttps://string-db.org/network/413404.Rmag_0074TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: tcx:Tcr_1289 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexa [...]
Rmag_0075 protein networkhttps://string-db.org/network/413404.Rmag_0075PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tcx:Tcr_1962 4Fe-4S ferredoxin, iron-sulfur binding.
Rmag_0076 protein networkhttps://string-db.org/network/413404.Rmag_0076KEGG: tcx:Tcr_1961 hypothetical protein.
znuC protein networkhttps://string-db.org/network/413404.Rmag_0077ABC transporter related protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superf [...]
polA protein networkhttps://string-db.org/network/413404.Rmag_0078DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
argS protein networkhttps://string-db.org/network/413404.Rmag_0079KEGG: tcx:Tcr_0198 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase.
Rmag_0080 protein networkhttps://string-db.org/network/413404.Rmag_0080PFAM: UvrD/REP helicase; KEGG: cbu:CBU_1230 UvrD/REP helicase family protein; Belongs to the helicase family. UvrD subfamily.
thiE protein networkhttps://string-db.org/network/413404.Rmag_0082Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine [...]
Rmag_0083 protein networkhttps://string-db.org/network/413404.Rmag_0083PFAM: protein of unknown function DUF1239.
Rmag_0084 protein networkhttps://string-db.org/network/413404.Rmag_0084PFAM: OstA family protein; KEGG: noc:Noc_2791 OstA-like protein.
sat protein networkhttps://string-db.org/network/413404.Rmag_0085KEGG: tbd:Tbd_0874 ATP-sulfurylase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family.
Rmag_0086 protein networkhttps://string-db.org/network/413404.Rmag_0086KEGG: tbd:Tbd_2284 hypothetical protein.
Rmag_0087 protein networkhttps://string-db.org/network/413404.Rmag_0087TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tbd:Tbd_2283 adenylylsulfate reductase, beta subunit.
Rmag_0088 protein networkhttps://string-db.org/network/413404.Rmag_0088TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: tbd:Tbd_2282 adenylylsulfate reductase, alpha subunit.
Rmag_0089 protein networkhttps://string-db.org/network/413404.Rmag_0089KEGG: tbd:Tbd_2281 hypothetical protein.
Rmag_0090 protein networkhttps://string-db.org/network/413404.Rmag_0090KEGG: tbd:Tbd_2280 putative peptidyl-prolyl cis-trans isomerase.
Rmag_0091 protein networkhttps://string-db.org/network/413404.Rmag_0091KEGG: tbd:Tbd_1503 hypothetical protein.
hppA protein networkhttps://string-db.org/network/413404.Rmag_0092V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive [...]
adk protein networkhttps://string-db.org/network/413404.Rmag_0093Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
pfp protein networkhttps://string-db.org/network/413404.Rmag_0094Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor i [...]
cysS protein networkhttps://string-db.org/network/413404.Rmag_0097KEGG: mca:MCA0509 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
Rmag_0098 protein networkhttps://string-db.org/network/413404.Rmag_0098PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tcx:Tcr_1387 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
leuB protein networkhttps://string-db.org/network/413404.Rmag_00993-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...]
Rmag_0101 protein networkhttps://string-db.org/network/413404.Rmag_0101PFAM: NUDIX hydrolase; KEGG: noc:Noc_2420 NUDIX hydrolase.
lysA protein networkhttps://string-db.org/network/413404.Rmag_0103Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
Rmag_0104 protein networkhttps://string-db.org/network/413404.Rmag_0104PFAM: protein of unknown function UPF0044; KEGG: pmu:PM0713 putative RNA-binding protein containing KH domain.
lpxB protein networkhttps://string-db.org/network/413404.Rmag_0105lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid t [...]
Rmag_0106 protein networkhttps://string-db.org/network/413404.Rmag_0106KEGG: cbu:CBU_0098 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; Belongs to the NadC/ModD family.
cysQ protein networkhttps://string-db.org/network/413404.Rmag_01073'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
rpoD protein networkhttps://string-db.org/network/413404.Rmag_0108RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is [...]
prs protein networkhttps://string-db.org/network/413404.Rmag_0109Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...]
ispE protein networkhttps://string-db.org/network/413404.Rmag_01104-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
orn protein networkhttps://string-db.org/network/413404.Rmag_0111Exonuclease, RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.
trpD protein networkhttps://string-db.org/network/413404.Rmag_0112Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranila [...]
Rmag_0113 protein networkhttps://string-db.org/network/413404.Rmag_0113Aminopeptidase P, Metallo peptidase, MEROPS family M24B; PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: aci:ACIAD1126 aminopeptidase P; Belongs to the [...]
Rmag_0114 protein networkhttps://string-db.org/network/413404.Rmag_0114Hypothetical protein.
Rmag_0115 protein networkhttps://string-db.org/network/413404.Rmag_0115KEGG: tbd:Tbd_2558 hypothetical protein.
proC protein networkhttps://string-db.org/network/413404.Rmag_0116Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
Rmag_0117 protein networkhttps://string-db.org/network/413404.Rmag_0117KEGG: tcx:Tcr_0265 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase.
Rmag_0118 protein networkhttps://string-db.org/network/413404.Rmag_0118Aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: hin:HI1554 adenosylmethionine--8-amino-7-oxononanoate transaminase; [...]
priA protein networkhttps://string-db.org/network/413404.Rmag_0120Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...]
ybeY protein networkhttps://string-db.org/network/413404.Rmag_0121Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
tilS protein networkhttps://string-db.org/network/413404.Rmag_0122tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...]
accA protein networkhttps://string-db.org/network/413404.Rmag_0123acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carr [...]
Rmag_0124 protein networkhttps://string-db.org/network/413404.Rmag_0124PFAM: protein of unknown function DUF47; KEGG: pae:PA5208 hypothetical protein.
Rmag_0125 protein networkhttps://string-db.org/network/413404.Rmag_0125PFAM: phosphate transporter; KEGG: csa:Csal_0712 phosphate transporter.
Rmag_0126 protein networkhttps://string-db.org/network/413404.Rmag_0126PFAM: BolA family protein; KEGG: mca:MCA0260 toluene-tolerance protein, putative; Belongs to the BolA/IbaG family.
Rmag_0127 protein networkhttps://string-db.org/network/413404.Rmag_0127PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: tcx:Tcr_0779 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family.
Rmag_0128 protein networkhttps://string-db.org/network/413404.Rmag_0128KEGG: gme:Gmet_2337 hypothetical protein.
Rmag_0129 protein networkhttps://string-db.org/network/413404.Rmag_0129PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: bcz:BCZK0793 alginate O-acetyltransferase; Belongs to the membrane-bound acyltransferase family.
tyrS protein networkhttps://string-db.org/network/413404.Rmag_0132tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
proA protein networkhttps://string-db.org/network/413404.Rmag_0133Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclizat [...]
Rmag_0134 protein networkhttps://string-db.org/network/413404.Rmag_0134KEGG: pfl:PFL_5441 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.
lptE protein networkhttps://string-db.org/network/413404.Rmag_0135Hypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may [...]
ftsH protein networkhttps://string-db.org/network/413404.Rmag_0136Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral mem [...]
Rmag_0137 protein networkhttps://string-db.org/network/413404.Rmag_0137Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...]
glmM protein networkhttps://string-db.org/network/413404.Rmag_0138Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
rnfA protein networkhttps://string-db.org/network/413404.Rmag_0139Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
rnfB protein networkhttps://string-db.org/network/413404.Rmag_0140Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...]
rnfC protein networkhttps://string-db.org/network/413404.Rmag_0141Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacteri [...]
rnfD protein networkhttps://string-db.org/network/413404.Rmag_0142Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD fam [...]
rnfG protein networkhttps://string-db.org/network/413404.Rmag_0143Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
Rmag_0144 protein networkhttps://string-db.org/network/413404.Rmag_0144KEGG: tcx:Tcr_0902 hypothetical protein.
sucD protein networkhttps://string-db.org/network/413404.Rmag_0145succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GT [...]
sucC protein networkhttps://string-db.org/network/413404.Rmag_0146succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP [...]
efp protein networkhttps://string-db.org/network/413404.Rmag_0147Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a pr [...]
Rmag_0148 protein networkhttps://string-db.org/network/413404.Rmag_0148PFAM: tRNA synthetase, class II (D, K and N); KEGG: cps:CPS_4763 conserved hypothetical protein TIGR00462.
Rmag_0149 protein networkhttps://string-db.org/network/413404.Rmag_0149PFAM: Sel1 domain protein repeat-containing protein; KEGG: lpf:lpl1180 hypothetical protein.
argG protein networkhttps://string-db.org/network/413404.Rmag_0151PFAM: argininosuccinate synthase; KEGG: sde:Sde_2423 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
Rmag_0152 protein networkhttps://string-db.org/network/413404.Rmag_0152TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aci:ACIAD0342 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl [...]
murF protein networkhttps://string-db.org/network/413404.Rmag_0153UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of mure [...]
murE protein networkhttps://string-db.org/network/413404.Rmag_0155UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG [...]
Rmag_0156 protein networkhttps://string-db.org/network/413404.Rmag_0156Sulfate thiol esterase SoxB; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: tcx:Tcr_1549 sulfate thiol esterase; Belongs [...]
Rmag_0158 protein networkhttps://string-db.org/network/413404.Rmag_0158KpsF/GutQ family protein; KEGG: noc:Noc_2788 sugar phosphate isomerase involved in capsule formation, KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isom [...]
Rmag_0159 protein networkhttps://string-db.org/network/413404.Rmag_0159PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bbr:BB2274 low molecular weight protein-tyrosine-phosphatase.
rpsL protein networkhttps://string-db.org/network/413404.Rmag_0160SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.
rpsG protein networkhttps://string-db.org/network/413404.Rmag_0161SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit int [...]
fusA protein networkhttps://string-db.org/network/413404.Rmag_0162Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocat [...]
tuf1 protein networkhttps://string-db.org/network/413404.Rmag_0163Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
rpsJ protein networkhttps://string-db.org/network/413404.Rmag_0164SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
rplC protein networkhttps://string-db.org/network/413404.Rmag_0165LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rplD protein networkhttps://string-db.org/network/413404.Rmag_0166LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It make [...]
rplW protein networkhttps://string-db.org/network/413404.Rmag_0167LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main doc [...]
rplB protein networkhttps://string-db.org/network/413404.Rmag_0168LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It [...]
rpsS protein networkhttps://string-db.org/network/413404.Rmag_0169SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplV protein networkhttps://string-db.org/network/413404.Rmag_0170LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 5 [...]
rpsC protein networkhttps://string-db.org/network/413404.Rmag_0171SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplP protein networkhttps://string-db.org/network/413404.Rmag_0172LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpmC protein networkhttps://string-db.org/network/413404.Rmag_0173PFAM: ribosomal protein L29; KEGG: tcx:Tcr_0303 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
rpsQ protein networkhttps://string-db.org/network/413404.Rmag_0174SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rplN protein networkhttps://string-db.org/network/413404.Rmag_0175LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rplX protein networkhttps://string-db.org/network/413404.Rmag_0176LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rplE protein networkhttps://string-db.org/network/413404.Rmag_0177LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberanc [...]
rpsN protein networkhttps://string-db.org/network/413404.Rmag_0178SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the u [...]
rpsH protein networkhttps://string-db.org/network/413404.Rmag_0179SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to [...]
rplF protein networkhttps://string-db.org/network/413404.Rmag_0180LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the [...]
rplR protein networkhttps://string-db.org/network/413404.Rmag_0181LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuber [...]
rpsE protein networkhttps://string-db.org/network/413404.Rmag_0182SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
rpmD protein networkhttps://string-db.org/network/413404.Rmag_0183PFAM: ribosomal protein L30; KEGG: cps:CPS_0619 ribosomal protein L30.
rplO protein networkhttps://string-db.org/network/413404.Rmag_0184LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
secY protein networkhttps://string-db.org/network/413404.Rmag_0185Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral [...]
rpmJ protein networkhttps://string-db.org/network/413404.Rmag_0186PFAM: ribosomal protein L36; KEGG: vpa:VP0278 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
rpsM protein networkhttps://string-db.org/network/413404.Rmag_0187SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L [...]
rpsK protein networkhttps://string-db.org/network/413404.Rmag_0188SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belo [...]
rpsD protein networkhttps://string-db.org/network/413404.Rmag_0189SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpoA protein networkhttps://string-db.org/network/413404.Rmag_0190DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplQ protein networkhttps://string-db.org/network/413404.Rmag_0191PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17.
rpsU protein networkhttps://string-db.org/network/413404.Rmag_0192PFAM: ribosomal protein S21; KEGG: tcx:Tcr_1809 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
Rmag_0196 protein networkhttps://string-db.org/network/413404.Rmag_0196KEGG: noc:Noc_2728 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.
Rmag_0197 protein networkhttps://string-db.org/network/413404.Rmag_0197Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotide [...]
Rmag_0199 protein networkhttps://string-db.org/network/413404.Rmag_0199KEGG: nmu:Nmul_A0722 hypothetical protein.
engB protein networkhttps://string-db.org/network/413404.Rmag_0200Cell division checkpoint GTPase YihA; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily [...]
Rmag_0201 protein networkhttps://string-db.org/network/413404.Rmag_0201KEGG: sdn:Sden_1464 cytochrome c, class I.
Rmag_0202 protein networkhttps://string-db.org/network/413404.Rmag_0202KEGG: mag:amb3084 cytochrome c4 precursor.
Rmag_0203 protein networkhttps://string-db.org/network/413404.Rmag_0203PFAM: cytochrome c, class I; KEGG: ppr:PBPRA3501 putative cytochrome c4.
tig protein networkhttps://string-db.org/network/413404.Rmag_0204Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...]
clpP protein networkhttps://string-db.org/network/413404.Rmag_0205ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the de [...]
clpX protein networkhttps://string-db.org/network/413404.Rmag_0206ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in th [...]
hflX protein networkhttps://string-db.org/network/413404.Rmag_0207GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPa [...]
lon protein networkhttps://string-db.org/network/413404.Rmag_0208ATP-dependent proteinase, Serine peptidase, MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- live [...]
Rmag_0209 protein networkhttps://string-db.org/network/413404.Rmag_020916S rRNA m(5)C-967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
Rmag_0210 protein networkhttps://string-db.org/network/413404.Rmag_0210Thiol-disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the proce [...]
pepA protein networkhttps://string-db.org/network/413404.Rmag_0211Aminopeptidase A, Metallo peptidase, MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal am [...]
Rmag_0213 protein networkhttps://string-db.org/network/413404.Rmag_0213KEGG: tcx:Tcr_0450 hypothetical protein.
Rmag_0214 protein networkhttps://string-db.org/network/413404.Rmag_0214Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: vvy:VV0994 hypothetical protein.
Rmag_0215 protein networkhttps://string-db.org/network/413404.Rmag_0215KEGG: vpa:VP0813 putative nitrogen regulatory protein P-II family protein.
Rmag_0216 protein networkhttps://string-db.org/network/413404.Rmag_0216PFAM: protein of unknown function DUF1538; KEGG: vpa:VP0812 hypothetical protein.
Rmag_0217 protein networkhttps://string-db.org/network/413404.Rmag_0217PFAM: protein of unknown function DUF1538; KEGG: cps:CPS_1953 hypothetical protein.
Rmag_0218 protein networkhttps://string-db.org/network/413404.Rmag_0218Aminodeoxychorismate lyase apoprotein; PFAM: aminotransferase, class IV; KEGG: noc:Noc_1662 aminotransferase, class IV.
tmk protein networkhttps://string-db.org/network/413404.Rmag_0220Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
Rmag_0221 protein networkhttps://string-db.org/network/413404.Rmag_0221KEGG: cbu:CBU_0500 DNA polymerase III, delta prime subunit; similar to ATPases involved in DNA replication.
hemL protein networkhttps://string-db.org/network/413404.Rmag_0222Aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: cps:CPS_4629 glutamate-1-semialdehyde-2,1-aminomutase.
Rmag_0223 protein networkhttps://string-db.org/network/413404.Rmag_0223TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: tcx:Tcr_0999 HAD-superfamily subfamily IB, PSPase-like.
Rmag_0224 protein networkhttps://string-db.org/network/413404.Rmag_0224KEGG: tbd:Tbd_0575 hypothetical protein.
Rmag_0225 protein networkhttps://string-db.org/network/413404.Rmag_0225PFAM: SirA family protein; KEGG: mag:amb0858 predicted redox protein; Belongs to the sulfur carrier protein TusA family.
rpiA protein networkhttps://string-db.org/network/413404.Rmag_0227Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Rmag_0228 protein networkhttps://string-db.org/network/413404.Rmag_0228Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference fo [...]
argB protein networkhttps://string-db.org/network/413404.Rmag_0232N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
Rmag_0233 protein networkhttps://string-db.org/network/413404.Rmag_0233Dihydroorotate oxidase B, electron transfer subunit; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: noc:Noc_0363 dihydroorotate dehydroge [...]
Rmag_0234 protein networkhttps://string-db.org/network/413404.Rmag_0234Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
Rmag_0235 protein networkhttps://string-db.org/network/413404.Rmag_0235Membrane protein-like protein; KEGG: lpp:lpp1719 hypothetical protein.
Rmag_0236 protein networkhttps://string-db.org/network/413404.Rmag_0236Microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62; PFAM: peptidase U62, modulator of DNA gyrase; KEGG: plu:plu4064 tldD protein, suppresses the inhibitory activity of the [...]
nuoA protein networkhttps://string-db.org/network/413404.Rmag_0237NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
nuoB protein networkhttps://string-db.org/network/413404.Rmag_0238NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation [...]
nuoC protein networkhttps://string-db.org/network/413404.Rmag_0239NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
nuoD protein networkhttps://string-db.org/network/413404.Rmag_0240NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
Rmag_0241 protein networkhttps://string-db.org/network/413404.Rmag_0241KEGG: tcx:Tcr_0821 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit.
Rmag_0242 protein networkhttps://string-db.org/network/413404.Rmag_0242NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
Rmag_0243 protein networkhttps://string-db.org/network/413404.Rmag_0243NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation [...]
nuoH protein networkhttps://string-db.org/network/413404.Rmag_0244NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
nuoI protein networkhttps://string-db.org/network/413404.Rmag_0245NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
Rmag_0246 protein networkhttps://string-db.org/network/413404.Rmag_0246NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation [...]
nuoK protein networkhttps://string-db.org/network/413404.Rmag_0247NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
Rmag_0248 protein networkhttps://string-db.org/network/413404.Rmag_0248KEGG: eba:ebA4846 NADH dehydrogenase I, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NA [...]
Rmag_0249 protein networkhttps://string-db.org/network/413404.Rmag_0249NADH dehydrogenase subunit M; KEGG: tcx:Tcr_0829 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquino [...]
nuoN protein networkhttps://string-db.org/network/413404.Rmag_0250NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in t [...]
Rmag_0251 protein networkhttps://string-db.org/network/413404.Rmag_0251PFAM: glycosyl hydrolase, BNR repeat-containing protein; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
Rmag_0253 protein networkhttps://string-db.org/network/413404.Rmag_0253PFAM: outer membrane efflux protein; KEGG: cvi:CV1734 probable outer membrane protein.
Rmag_0254 protein networkhttps://string-db.org/network/413404.Rmag_0254Hypothetical protein.
Rmag_0255 protein networkhttps://string-db.org/network/413404.Rmag_0255PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: par:Psyc_1599 ABC drug efflux transporter, fused ATPase and inner mebrane subunits.
Rmag_0256 protein networkhttps://string-db.org/network/413404.Rmag_0256PFAM: secretion protein HlyD family protein; KEGG: par:Psyc_1598 HlyD family secretion protein.
bioC protein networkhttps://string-db.org/network/413404.Rmag_0257Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synth [...]
Rmag_0258 protein networkhttps://string-db.org/network/413404.Rmag_0258PFAM: periplasmic solute binding protein; KEGG: rty:RT0013 probable zinc/manganese ABC transporter substrate binding protein.
cmoB protein networkhttps://string-db.org/network/413404.Rmag_0259Methyltransferase, putative; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in [...]
Rmag_0260 protein networkhttps://string-db.org/network/413404.Rmag_0260Hypothetical protein.
frr protein networkhttps://string-db.org/network/413404.Rmag_0261Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...]
pyrH protein networkhttps://string-db.org/network/413404.Rmag_0262Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
uvrA protein networkhttps://string-db.org/network/413404.Rmag_0263Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
Rmag_0264 protein networkhttps://string-db.org/network/413404.Rmag_0264Hypothetical protein.
purN protein networkhttps://string-db.org/network/413404.Rmag_0265Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
purM protein networkhttps://string-db.org/network/413404.Rmag_0266Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: eca:ECA1254 phosphoribosylaminoimidazole synthetase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related prot [...]
Rmag_0267 protein networkhttps://string-db.org/network/413404.Rmag_0267PFAM: CDP-alcohol phosphatidyltransferase; KEGG: noc:Noc_1186 CDP-alcohol phosphatidyltransferase.
Rmag_0268 protein networkhttps://string-db.org/network/413404.Rmag_0268Regulatory inactivation of DnaA Hda protein; PFAM: Chromosomal replication initiator, DnaA; KEGG: cbu:CBU_1734 chromosomal replication initiator protein DnaA; Belongs to the DnaA family.
Rmag_0269 protein networkhttps://string-db.org/network/413404.Rmag_0269Hypothetical protein.
cysG protein networkhttps://string-db.org/network/413404.Rmag_0270uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form [...]
Rmag_0271 protein networkhttps://string-db.org/network/413404.Rmag_0271KEGG: tcx:Tcr_1620 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydro [...]
Rmag_0272 protein networkhttps://string-db.org/network/413404.Rmag_0272TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: psp:PSPPH_3309 cytochrome c-type biogenesis protein CcmF.
Rmag_0273 protein networkhttps://string-db.org/network/413404.Rmag_0273PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dar:Daro_1405 TPR repeat.
dapE protein networkhttps://string-db.org/network/413404.Rmag_0274Succinyldiaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in [...]
trmD protein networkhttps://string-db.org/network/413404.Rmag_0275tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
Rmag_0276 protein networkhttps://string-db.org/network/413404.Rmag_0276PFAM: nitrogen regulatory protein P-II; KEGG: mca:MCA2137 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
Rmag_0277 protein networkhttps://string-db.org/network/413404.Rmag_0277TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cps:CPS_3995 ammonium transporter.
dapA protein networkhttps://string-db.org/network/413404.Rmag_0278Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
Rmag_0279 protein networkhttps://string-db.org/network/413404.Rmag_0279KEGG: dar:Daro_0847 NlpBDapX lipoprotein.
ligA protein networkhttps://string-db.org/network/413404.Rmag_0280DNA ligase (NAD(+)); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the ene [...]
Rmag_0281 protein networkhttps://string-db.org/network/413404.Rmag_0281PFAM: nitrogen regulatory protein P-II; KEGG: sde:Sde_0232 nitrogen regulatory protein P-II (GlnB, GlnK).
Rmag_0283 protein networkhttps://string-db.org/network/413404.Rmag_0283Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: bxe:Bxe_A1873 hypothetical protein.
Rmag_0284 protein networkhttps://string-db.org/network/413404.Rmag_0284PFAM: ANTAR domain protein; KEGG: mca:MCA0588 response regulator NasT.
tatC protein networkhttps://string-db.org/network/413404.Rmag_0285Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in t [...]
Rmag_0286 protein networkhttps://string-db.org/network/413404.Rmag_0286TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: neu:NE0638 mttA/Hcf106 family.
tatA protein networkhttps://string-db.org/network/413404.Rmag_0287Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...]
hisE protein networkhttps://string-db.org/network/413404.Rmag_0288PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: tbd:Tbd_1706 phosphoribosyl-ATP pyrophosphohydrolase.
hisI protein networkhttps://string-db.org/network/413404.Rmag_0289phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
Rmag_0290 protein networkhttps://string-db.org/network/413404.Rmag_0290NADPH-glutathione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: tcx:Tcr_0140 glutathione r [...]
prfB protein networkhttps://string-db.org/network/413404.Rmag_0292Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
rpsO protein networkhttps://string-db.org/network/413404.Rmag_0293SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging sev [...]
Rmag_0294 protein networkhttps://string-db.org/network/413404.Rmag_0294PFAM: lipid A biosynthesis acyltransferase; KEGG: psb:Psyr_1614 lipid A biosynthesis acyltransferase.
dnaG protein networkhttps://string-db.org/network/413404.Rmag_0295DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
Rmag_0296 protein networkhttps://string-db.org/network/413404.Rmag_0296Peptidoglycan synthetase FtsI; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: tcx:Tcr_0562 peptidoglycan glycosyltransferase.
Rmag_0297 protein networkhttps://string-db.org/network/413404.Rmag_0297Hypothetical protein.
rsmH protein networkhttps://string-db.org/network/413404.Rmag_0298S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
parC protein networkhttps://string-db.org/network/413404.Rmag_0302DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circula [...]
Rmag_0303 protein networkhttps://string-db.org/network/413404.Rmag_0303preQ(0) biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: tcx:Tcr_1389 6-pyruvoyl tetrahydropterin synthase and hypothetical protein.
folE2 protein networkhttps://string-db.org/network/413404.Rmag_0304GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
Rmag_0305 protein networkhttps://string-db.org/network/413404.Rmag_03053-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-p [...]
gyrA protein networkhttps://string-db.org/network/413404.Rmag_0306DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
prfC protein networkhttps://string-db.org/network/413404.Rmag_0307Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has stron [...]
Rmag_0308 protein networkhttps://string-db.org/network/413404.Rmag_0308PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: xcb:XC_0132 deoxycytidylate deaminase.
mraY protein networkhttps://string-db.org/network/413404.Rmag_0309phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
Rmag_0310 protein networkhttps://string-db.org/network/413404.Rmag_0310PFAM: peptidylprolyl isomerase, FKBP-type; peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: tde:TDE2391 peptidyl-prolyl cis-trans isomerase.
Rmag_0311 protein networkhttps://string-db.org/network/413404.Rmag_0311PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: par:Psyc_0327 putative 4Fe-4S ferredoxin.
Rmag_0312 protein networkhttps://string-db.org/network/413404.Rmag_0312Alanine-glyoxylate aminotransferase apoenzyme; PFAM: aminotransferase, class V; KEGG: cps:CPS_2190 aminotransferase, class V.
Rmag_0313 protein networkhttps://string-db.org/network/413404.Rmag_0313PFAM: FAD linked oxidase domain protein; KEGG: psp:PSPPH_3252 glycolate oxidase, GlcD subunit.
Rmag_0314 protein networkhttps://string-db.org/network/413404.Rmag_0314FAD/FMN-containing dehydrogenases-like protein; KEGG: eba:ebA4491 FAD linked oxidase.
Rmag_0315 protein networkhttps://string-db.org/network/413404.Rmag_0315PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: neu:NE0673 glycolate oxidase (iron-sulfur subunit) prot [...]
Rmag_0316 protein networkhttps://string-db.org/network/413404.Rmag_0316Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; KEGG: pol:Bpro_0171 rhodanese-like.
Rmag_0317 protein networkhttps://string-db.org/network/413404.Rmag_0317PFAM: major facilitator superfamily MFS_1; KEGG: vvy:VV2596 putative AmpG protein.
nagZ protein networkhttps://string-db.org/network/413404.Rmag_0318Beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving ris [...]
Rmag_0319 protein networkhttps://string-db.org/network/413404.Rmag_0319Hypothetical protein.
Rmag_0320 protein networkhttps://string-db.org/network/413404.Rmag_0320PFAM: UvrD/REP helicase; KEGG: pha:PSHAa0122 DNA-dependent ATPase I.
Rmag_0321 protein networkhttps://string-db.org/network/413404.Rmag_0321Hypothetical protein.
Rmag_0322 protein networkhttps://string-db.org/network/413404.Rmag_0322TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: sde:Sde_1081 hypothetical protein.
Rmag_0323 protein networkhttps://string-db.org/network/413404.Rmag_0323PFAM: Redoxin domain protein; KEGG: tbd:Tbd_2118 thioredoxin.
Rmag_0324 protein networkhttps://string-db.org/network/413404.Rmag_0324TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: sdn:Sden_1646 arsenate reductase.
Rmag_0325 protein networkhttps://string-db.org/network/413404.Rmag_0325PFAM: Glutathione S-transferase, N-terminal domain; KEGG: tcx:Tcr_1309 glutathione S-transferase-like.
rsfS protein networkhttps://string-db.org/network/413404.Rmag_0326Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S r [...]
nadD protein networkhttps://string-db.org/network/413404.Rmag_0327Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
Rmag_0328 protein networkhttps://string-db.org/network/413404.Rmag_0328PFAM: beta-lactamase domain protein; KEGG: bsu:BG12648 involved in polyketide synthesis.
Rmag_0329 protein networkhttps://string-db.org/network/413404.Rmag_0329Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
Rmag_0331 protein networkhttps://string-db.org/network/413404.Rmag_0331Putative prophage repressor; PFAM: peptidase S24, S26A and S26B; KEGG: tbd:Tbd_1516 hypothetical protein.
mutM protein networkhttps://string-db.org/network/413404.Rmag_0332DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. [...]
Rmag_0333 protein networkhttps://string-db.org/network/413404.Rmag_0333Membrane protein-like protein; KEGG: noc:Noc_1372 hypothetical protein.
Rmag_0334 protein networkhttps://string-db.org/network/413404.Rmag_0334Hypothetical protein.
Rmag_0336 protein networkhttps://string-db.org/network/413404.Rmag_0336Sodium/proton antiporter, NhaD family; PFAM: Citrate transporter; KEGG: sde:Sde_0065 Na+/H+ antiporter (NhaD family); TC 2.A.62.
coaX protein networkhttps://string-db.org/network/413404.Rmag_0337Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
Rmag_0338 protein networkhttps://string-db.org/network/413404.Rmag_0338KEGG: noc:Noc_1038 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib.
Rmag_0339 protein networkhttps://string-db.org/network/413404.Rmag_0339TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: noc:Noc_1041 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA famil [...]
ileS protein networkhttps://string-db.org/network/413404.Rmag_0340Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
aroB protein networkhttps://string-db.org/network/413404.Rmag_03413-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquin [...]
Rmag_0342 protein networkhttps://string-db.org/network/413404.Rmag_0342Hypothetical protein.
gatC protein networkhttps://string-db.org/network/413404.Rmag_0343aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu [...]
gatA protein networkhttps://string-db.org/network/413404.Rmag_0344aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack [...]
gatB protein networkhttps://string-db.org/network/413404.Rmag_0345aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu [...]
selO protein networkhttps://string-db.org/network/413404.Rmag_0346Protein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
Rmag_0347 protein networkhttps://string-db.org/network/413404.Rmag_0347PFAM: peptidase M50; KEGG: tcx:Tcr_1229 peptidase M50.
proS protein networkhttps://string-db.org/network/413404.Rmag_0348prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
psd protein networkhttps://string-db.org/network/413404.Rmag_0349Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
Rmag_0350 protein networkhttps://string-db.org/network/413404.Rmag_0350PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: noc:Noc_2263 hypothetical protein.
eno protein networkhttps://string-db.org/network/413404.Rmag_0351Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
dnaJ protein networkhttps://string-db.org/network/413404.Rmag_0352Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
dnaK protein networkhttps://string-db.org/network/413404.Rmag_0353Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
coaD protein networkhttps://string-db.org/network/413404.Rmag_0354Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD [...]
Rmag_0355 protein networkhttps://string-db.org/network/413404.Rmag_035516S rRNA m(2)G-966 methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.
ppa protein networkhttps://string-db.org/network/413404.Rmag_0356Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
Rmag_0361 protein networkhttps://string-db.org/network/413404.Rmag_0361Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain pr [...]
Rmag_0362 protein networkhttps://string-db.org/network/413404.Rmag_0362PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: pol:Bpro_4433 two component transcriptional regulator, fis family.
Rmag_0363 protein networkhttps://string-db.org/network/413404.Rmag_0363PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pfl:PFL_0019 potassium uptake protein TrkA PA0016.
Rmag_0364 protein networkhttps://string-db.org/network/413404.Rmag_0364Potassium uptake protein, TrkH family; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
dinG protein networkhttps://string-db.org/network/413404.Rmag_0365Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase.
Rmag_0366 protein networkhttps://string-db.org/network/413404.Rmag_0366Dimethylallyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: ftl:FTL_1041 octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
rlmE protein networkhttps://string-db.org/network/413404.Rmag_036723S rRNA Um-2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
Rmag_0368 protein networkhttps://string-db.org/network/413404.Rmag_0368TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: sec:SC [...]
Rmag_0369 protein networkhttps://string-db.org/network/413404.Rmag_0369PFAM: acriflavin resistance protein; KEGG: lil:LA2439 acriflavine resistance protein homolog; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
leuD protein networkhttps://string-db.org/network/413404.Rmag_03713-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...]
leuC protein networkhttps://string-db.org/network/413404.Rmag_03723-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
Rmag_0373 protein networkhttps://string-db.org/network/413404.Rmag_0373TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: tbd:Tbd_0060 asparagine synthase, glutamine-hydrolyzing.
rnhA protein networkhttps://string-db.org/network/413404.Rmag_0374Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
Rmag_0376 protein networkhttps://string-db.org/network/413404.Rmag_0376KEGG: tbd:Tbd_2669 hypothetical protein.
Rmag_0378 protein networkhttps://string-db.org/network/413404.Rmag_0378PFAM: cyclase/dehydrase; KEGG: vpa:VP0645 hypothetical protein.
smpB protein networkhttps://string-db.org/network/413404.Rmag_0379SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
Rmag_0380 protein networkhttps://string-db.org/network/413404.Rmag_0380Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental con [...]
ndk protein networkhttps://string-db.org/network/413404.Rmag_0381Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, [...]
rlmN protein networkhttps://string-db.org/network/413404.Rmag_038223S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in t [...]
Rmag_0383 protein networkhttps://string-db.org/network/413404.Rmag_0383Hypothetical protein.
ispG protein networkhttps://string-db.org/network/413404.Rmag_03844-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG fa [...]
Rmag_0385 protein networkhttps://string-db.org/network/413404.Rmag_0385KEGG: cps:CPS_2123 hypothetical protein.
dxs protein networkhttps://string-db.org/network/413404.Rmag_03861-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...]
Rmag_0387 protein networkhttps://string-db.org/network/413404.Rmag_0387PFAM: peptidase U32; KEGG: son:SO1252 peptidase, U32 family.
Rmag_0388 protein networkhttps://string-db.org/network/413404.Rmag_038816S rRNA m(2)G 1207 methyltransferase; PFAM: methyltransferase small; KEGG: tcx:Tcr_0213 methyltransferase small.
Rmag_0389 protein networkhttps://string-db.org/network/413404.Rmag_0389TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: tbd:Tbd_2499 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
purL protein networkhttps://string-db.org/network/413404.Rmag_0392Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ri [...]
Rmag_0394 protein networkhttps://string-db.org/network/413404.Rmag_0394PFAM: protein of unknown function DUF28; KEGG: ilo:IL1088 uncharacterized conserved enzyme.
Rmag_0395 protein networkhttps://string-db.org/network/413404.Rmag_0395Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
aspS protein networkhttps://string-db.org/network/413404.Rmag_0396aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...]
Rmag_0397 protein networkhttps://string-db.org/network/413404.Rmag_0397PFAM: protein of unknown function DUF502; KEGG: mfa:Mfla_2385 protein of unknown function DUF502.
map protein networkhttps://string-db.org/network/413404.Rmag_0398Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
Rmag_0399 protein networkhttps://string-db.org/network/413404.Rmag_0399PFAM: peptidase M48, Ste24p; KEGG: vvy:VVA0973 Zn-dependent protease with chaperone function.
Rmag_0400 protein networkhttps://string-db.org/network/413404.Rmag_0400PFAM: LemA family protein; KEGG: sde:Sde_3150 divalent cation transporter.
dnaQ protein networkhttps://string-db.org/network/413404.Rmag_0404DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing func [...]
rpoZ protein networkhttps://string-db.org/network/413404.Rmag_0405DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alp [...]
Rmag_0408 protein networkhttps://string-db.org/network/413404.Rmag_0408Hypothetical protein.
Rmag_0409 protein networkhttps://string-db.org/network/413404.Rmag_0409Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: tcx:Tcr_0154 porphobilinogen synthase; Belongs to the ALAD family.
thiC protein networkhttps://string-db.org/network/413404.Rmag_0410Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methioni [...]
Rmag_0411 protein networkhttps://string-db.org/network/413404.Rmag_0411Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CM [...]
obg protein networkhttps://string-db.org/network/413404.Rmag_0412Small GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a [...]
proB protein networkhttps://string-db.org/network/413404.Rmag_0413Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
Rmag_0414 protein networkhttps://string-db.org/network/413404.Rmag_0414KEGG: hit:NTHI0077 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxyme [...]
panB protein networkhttps://string-db.org/network/413404.Rmag_0415Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopa [...]
panC protein networkhttps://string-db.org/network/413404.Rmag_0416Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
nfuA protein networkhttps://string-db.org/network/413404.Rmag_0417Nitrogen-fixing NifU domain protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S [...]
Rmag_0418 protein networkhttps://string-db.org/network/413404.Rmag_0418KEGG: tcx:Tcr_0164 hypothetical protein.
thiL protein networkhttps://string-db.org/network/413404.Rmag_0419Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamin [...]
dksA protein networkhttps://string-db.org/network/413404.Rmag_0420Transcriptional regulator TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regul [...]
Rmag_0421 protein networkhttps://string-db.org/network/413404.Rmag_0421TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tcx:Tcr_1242 HAD-superfamily hydrolase subfamily IA, variant 3.
Rmag_0423 protein networkhttps://string-db.org/network/413404.Rmag_0423TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: cbu:CBU_1200 isocitrate dehydrogenase, NADP-dependent.
Rmag_0425 protein networkhttps://string-db.org/network/413404.Rmag_0425PFAM: aminotransferase, class I and II; KEGG: hch:HCH_04972 aspartate/tyrosine/aromatic aminotransferase.
uvrB protein networkhttps://string-db.org/network/413404.Rmag_0426Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abn [...]
queE protein networkhttps://string-db.org/network/413404.Rmag_0427Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the bi [...]
Rmag_0428 protein networkhttps://string-db.org/network/413404.Rmag_0428PFAM: heat shock protein Hsp20; KEGG: rfe:RF_1004 small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
aroC protein networkhttps://string-db.org/network/413404.Rmag_0430Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
Rmag_0432 protein networkhttps://string-db.org/network/413404.Rmag_0432Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).
Rmag_0433 protein networkhttps://string-db.org/network/413404.Rmag_0433TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: ngo:NGO1678 hypothetical protein.
pdxH protein networkhttps://string-db.org/network/413404.Rmag_0434Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
aroE protein networkhttps://string-db.org/network/413404.Rmag_0435Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshiki [...]
Rmag_0436 protein networkhttps://string-db.org/network/413404.Rmag_0436TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: tcx:Tcr_0703 ribonuclease, Rne/Rng family.
Rmag_0437 protein networkhttps://string-db.org/network/413404.Rmag_0437PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nmu:Nmul_A0336 short-chain dehydrogenase/reductase SDR.
Rmag_0438 protein networkhttps://string-db.org/network/413404.Rmag_0438PFAM: protein of unknown function DUF185; KEGG: noc:Noc_0037 protein of unknown function DUF185.
uppP protein networkhttps://string-db.org/network/413404.Rmag_0439Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
Rmag_0440 protein networkhttps://string-db.org/network/413404.Rmag_0440TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: noc:Noc_1314 peptidase M, neutral zinc metallopeptidase, zinc-binding site.
Rmag_0441 protein networkhttps://string-db.org/network/413404.Rmag_0441PFAM: CinA domain protein; KEGG: reu:Reut_A2850 CinA, C-terminal; Belongs to the CinA family.
dusA protein networkhttps://string-db.org/network/413404.Rmag_0442tRNA-U16,U17-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target ur [...]
ftsA protein networkhttps://string-db.org/network/413404.Rmag_0443Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
lpxC protein networkhttps://string-db.org/network/413404.Rmag_0444UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed st [...]
Rmag_0445 protein networkhttps://string-db.org/network/413404.Rmag_0445TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosp [...]
Rmag_0446 protein networkhttps://string-db.org/network/413404.Rmag_0446TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: dar:Daro_3074 acetolactate synthase, small subunit.
ilvC protein networkhttps://string-db.org/network/413404.Rmag_0447Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yie [...]
Rmag_0448 protein networkhttps://string-db.org/network/413404.Rmag_0448KEGG: tcx:Tcr_0610 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the C [...]
leuA protein networkhttps://string-db.org/network/413404.Rmag_04492-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...]
Rmag_0450 protein networkhttps://string-db.org/network/413404.Rmag_0450Hypothetical protein.
argF protein networkhttps://string-db.org/network/413404.Rmag_0452Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs t [...]
argD protein networkhttps://string-db.org/network/413404.Rmag_0453TIGRFAM: acetylornithine and succinylornithine aminotransferases; PFAM: aminotransferase class-III; KEGG: nmu:Nmul_A1041 acetylornithine and succinylornithine aminotransferase; Belongs to the cla [...]
Rmag_0454 protein networkhttps://string-db.org/network/413404.Rmag_0454TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ilo:IL0395 S30EA ribosomal protein.
Rmag_0455 protein networkhttps://string-db.org/network/413404.Rmag_0455Magnesium transporter; Acts as a magnesium transporter.
Rmag_0456 protein networkhttps://string-db.org/network/413404.Rmag_0456Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha [...]
Rmag_0457 protein networkhttps://string-db.org/network/413404.Rmag_0457PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: eca:ECA3281 sigma-E factor regulatory protein.
Rmag_0458 protein networkhttps://string-db.org/network/413404.Rmag_04582-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
pnp protein networkhttps://string-db.org/network/413404.Rmag_0461Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
guaB protein networkhttps://string-db.org/network/413404.Rmag_0462Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
Rmag_0463 protein networkhttps://string-db.org/network/413404.Rmag_0463PFAM: SH3, type 3 domain protein; KEGG: tcx:Tcr_1504 SH3-like region.
valS protein networkhttps://string-db.org/network/413404.Rmag_0464valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
dnaX protein networkhttps://string-db.org/network/413404.Rmag_0466DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' [...]
Rmag_0467 protein networkhttps://string-db.org/network/413404.Rmag_0467PFAM: Nucleotidyl transferase; KEGG: pha:PSHAa2630 mannose-1-phosphate guanyltransferase-related protein.
Rmag_0468 protein networkhttps://string-db.org/network/413404.Rmag_0468PFAM: aminoglycoside phosphotransferase; KEGG: neu:NE0191 domain of unknown function DUF227.
Rmag_0469 protein networkhttps://string-db.org/network/413404.Rmag_0469Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase; PFAM: aminotransferase, class IV; KEGG: noc:Noc_2631 D-alanine transaminase.
Rmag_0470 protein networkhttps://string-db.org/network/413404.Rmag_0470Penicillin-binding protein 6, Serine peptidase, MEROPS family S11; PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: lpf:lpl1517 D-ala [...]
mrdB protein networkhttps://string-db.org/network/413404.Rmag_0471Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
Rmag_0472 protein networkhttps://string-db.org/network/413404.Rmag_0472PFAM: protein of unknown function DUF498; KEGG: cvi:CV0994 hypothetical protein.
Rmag_0473 protein networkhttps://string-db.org/network/413404.Rmag_0473PFAM: Sel1 domain protein repeat-containing protein; KEGG: hit:NTHI1567 hypothetical protein.
gltX protein networkhttps://string-db.org/network/413404.Rmag_0474glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
glnD protein networkhttps://string-db.org/network/413404.Rmag_0475UTP-GlnB uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD sense [...]
Rmag_0476 protein networkhttps://string-db.org/network/413404.Rmag_0476TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ppr:PBPRA3541 putative thioredoxin; Belongs to the thioredoxin family.
rho protein networkhttps://string-db.org/network/413404.Rmag_0477Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
Rmag_0478 protein networkhttps://string-db.org/network/413404.Rmag_0478PFAM: permease YjgP/YjgQ family protein; KEGG: mfa:Mfla_0221 permease YjgP/YjgQ.
queF protein networkhttps://string-db.org/network/413404.Rmag_0479GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 s [...]
pcnB protein networkhttps://string-db.org/network/413404.Rmag_0480poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencin [...]
xseB protein networkhttps://string-db.org/network/413404.Rmag_0481Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
Rmag_0482 protein networkhttps://string-db.org/network/413404.Rmag_0482Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; KEGG: pfo:Pfl_5006 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
fabH protein networkhttps://string-db.org/network/413404.Rmag_04833-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...]
plsX protein networkhttps://string-db.org/network/413404.Rmag_0484Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-AC [...]
rpmF protein networkhttps://string-db.org/network/413404.Rmag_0485TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: neu:NE1644 probable 50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family.
Rmag_0486 protein networkhttps://string-db.org/network/413404.Rmag_0486PFAM: protein of unknown function DUF177; KEGG: yps:YPTB2476 hypothetical protein.
Rmag_0487 protein networkhttps://string-db.org/network/413404.Rmag_0487PFAM: phospholipid/glycerol acyltransferase; KEGG: mfa:Mfla_0642 phospholipid/glycerol acyltransferase.
Rmag_0488 protein networkhttps://string-db.org/network/413404.Rmag_0488KEGG: sde:Sde_2151 flagellar FliJ and related; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain [...]
Rmag_0489 protein networkhttps://string-db.org/network/413404.Rmag_0489PFAM: protein of unknown function DUF195; KEGG: wsu:WS1465 hypothetical protein.
Rmag_0490 protein networkhttps://string-db.org/network/413404.Rmag_0490PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vfi:VF1039 short chain dehydrogenase.
Rmag_0491 protein networkhttps://string-db.org/network/413404.Rmag_0491PFAM: inositol monophosphatase; KEGG: eba:ebA6410 inositol monophosphatase (extragenic suppressor protein).
trmJ protein networkhttps://string-db.org/network/413404.Rmag_0492RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
htpG protein networkhttps://string-db.org/network/413404.Rmag_0493Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
Rmag_0495 protein networkhttps://string-db.org/network/413404.Rmag_0495Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion o [...]
hemF protein networkhttps://string-db.org/network/413404.Rmag_0496Coproporphyrinogen oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl g [...]
Rmag_0497 protein networkhttps://string-db.org/network/413404.Rmag_0497PFAM: SirA family protein; KEGG: noc:Noc_2653 SirA-like protein; Belongs to the sulfur carrier protein TusA family.
Rmag_0498 protein networkhttps://string-db.org/network/413404.Rmag_0498KEGG: mca:MCA1677 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
bioB protein networkhttps://string-db.org/network/413404.Rmag_0499Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily [...]
murG protein networkhttps://string-db.org/network/413404.Rmag_0500Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid interme [...]
Rmag_0501 protein networkhttps://string-db.org/network/413404.Rmag_0501Cell division-specific peptidoglycan biosynthesis regulator FtsW; PFAM: cell cycle protein; KEGG: lpp:lpp2668 cell division protein FtsW; Belongs to the SEDS family.
Rmag_0502 protein networkhttps://string-db.org/network/413404.Rmag_0502PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tcx:Tcr_1606 ABC transporter related.
Rmag_0504 protein networkhttps://string-db.org/network/413404.Rmag_0504TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: tcx:Tcr_1399 riboflavin synthase, alpha subunit.
ribB protein networkhttps://string-db.org/network/413404.Rmag_05053,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
ribH protein networkhttps://string-db.org/network/413404.Rmag_05066,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
nusB protein networkhttps://string-db.org/network/413404.Rmag_0507NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the rib [...]
Rmag_0509 protein networkhttps://string-db.org/network/413404.Rmag_0509PFAM: histidine triad (HIT) protein; KEGG: rfr:Rfer_1209 histidine triad (HIT) protein.
Rmag_0510 protein networkhttps://string-db.org/network/413404.Rmag_0510Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action du [...]
Rmag_0511 protein networkhttps://string-db.org/network/413404.Rmag_0511PFAM: major facilitator superfamily MFS_1; KEGG: tcx:Tcr_0326 major facilitator superfamily MFS_1.
bamD protein networkhttps://string-db.org/network/413404.Rmag_0512Putative transmembrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
Rmag_0513 protein networkhttps://string-db.org/network/413404.Rmag_0513(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in respo [...]
Rmag_0514 protein networkhttps://string-db.org/network/413404.Rmag_0514PFAM: protein of unknown function DUF528; KEGG: bur:Bcep18194_A5426 protein of unknown function DUF528.
tolB protein networkhttps://string-db.org/network/413404.Rmag_0515TolB, N-terminal domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
Rmag_0516 protein networkhttps://string-db.org/network/413404.Rmag_0516PFAM: OmpA/MotB domain protein; KEGG: noc:Noc_0146 OmpA/MotB.
Rmag_0517 protein networkhttps://string-db.org/network/413404.Rmag_0517PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: psp:PSPPH_3765 hypothetical protein.
Rmag_0518 protein networkhttps://string-db.org/network/413404.Rmag_0518PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: tcx:Tcr_0715 anthranilate synthase.
Rmag_0519 protein networkhttps://string-db.org/network/413404.Rmag_0519PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: cps:CPS_1844 conserved hypothetical protein TIGR00427.
nadE protein networkhttps://string-db.org/network/413404.Rmag_0520NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
Rmag_0521 protein networkhttps://string-db.org/network/413404.Rmag_0521Hypothetical protein; KEGG: mhu:Mhun_1900 putative transcriptional regulator.
hemH protein networkhttps://string-db.org/network/413404.Rmag_0522Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
Rmag_0523 protein networkhttps://string-db.org/network/413404.Rmag_0523Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [...]
Rmag_0524 protein networkhttps://string-db.org/network/413404.Rmag_0524PFAM: ribonucleotide reductase; KEGG: eca:ECA1198 ribonucleoside-diphosphate reductase 1 beta chain.
Rmag_0525 protein networkhttps://string-db.org/network/413404.Rmag_0525PFAM: ferredoxin; KEGG: sgl:SG1586 hypothetical protein.
Rmag_0526 protein networkhttps://string-db.org/network/413404.Rmag_0526KEGG: tdn:Tmden_0484 putative dUTPase.
rnt protein networkhttps://string-db.org/network/413404.Rmag_0527RNAse T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue [...]
Rmag_0528 protein networkhttps://string-db.org/network/413404.Rmag_0528PFAM: GCN5-related N-acetyltransferase; KEGG: reu:Reut_A2066 amino-acid N-acetyltransferase (ArgA); Belongs to the acetyltransferase family.
ilvD protein networkhttps://string-db.org/network/413404.Rmag_0529KEGG: mca:MCA2082 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
rnr protein networkhttps://string-db.org/network/413404.Rmag_0530RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
purA protein networkhttps://string-db.org/network/413404.Rmag_0531Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
hisZ protein networkhttps://string-db.org/network/413404.Rmag_0532ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
Rmag_0533 protein networkhttps://string-db.org/network/413404.Rmag_0533Protease FtsH subunit HflC; HflC and HflK could regulate a protease.
Rmag_0534 protein networkhttps://string-db.org/network/413404.Rmag_0534Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
lptD protein networkhttps://string-db.org/network/413404.Rmag_0535Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
Rmag_0536 protein networkhttps://string-db.org/network/413404.Rmag_0536PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: lpn:lpg0298 peptidyl-prolyl cis-trans isomerase D (SurA).
Rmag_0537 protein networkhttps://string-db.org/network/413404.Rmag_053723S rRNA Gm-2251 2'-O-methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: [...]
Rmag_0538 protein networkhttps://string-db.org/network/413404.Rmag_0538TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: son:SO1484 isocitrate lyase.
Rmag_0541 protein networkhttps://string-db.org/network/413404.Rmag_0541PFAM: protein of unknown function DUF493; KEGG: neu:NE1487 hypothetical protein; Belongs to the UPF0250 family.
lipB protein networkhttps://string-db.org/network/413404.Rmag_0542Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...]
lipA protein networkhttps://string-db.org/network/413404.Rmag_0543Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes [...]
Rmag_0544 protein networkhttps://string-db.org/network/413404.Rmag_0544PFAM: acriflavin resistance protein; KEGG: gme:Gmet_3127 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
Rmag_0545 protein networkhttps://string-db.org/network/413404.Rmag_0545TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pha:PSHAa2832 multidrug efflux system (AcrA/AcrE); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
pdxA protein networkhttps://string-db.org/network/413404.Rmag_05464-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decar [...]
rsmA protein networkhttps://string-db.org/network/413404.Rmag_0547Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...]
Rmag_0548 protein networkhttps://string-db.org/network/413404.Rmag_0548PFAM: ApaG domain protein; KEGG: neu:NE1573 ApaG protein.
Rmag_0549 protein networkhttps://string-db.org/network/413404.Rmag_0549Bis(5'nucleosyl)-tetraphosphatase, ApaH; KEGG: tbd:Tbd_0168 bis(5'-nucleosyl)-tetraphosphatase (symmetrical); TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoestera [...]
dapF protein networkhttps://string-db.org/network/413404.Rmag_0550Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
Rmag_0551 protein networkhttps://string-db.org/network/413404.Rmag_0551PFAM: protein of unknown function DUF971; KEGG: eba:ebB94 hypothetical protein.
Rmag_0552 protein networkhttps://string-db.org/network/413404.Rmag_0552TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: neu:NE1711 membrane-associated Zn-dependent proteases 1.
bamA protein networkhttps://string-db.org/network/413404.Rmag_0553Surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
lpxD protein networkhttps://string-db.org/network/413404.Rmag_0554UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lip [...]
fabZ protein networkhttps://string-db.org/network/413404.Rmag_05553-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and uns [...]
Rmag_0556 protein networkhttps://string-db.org/network/413404.Rmag_0556acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer memb [...]
murJ protein networkhttps://string-db.org/network/413404.Rmag_0557Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
Rmag_0558 protein networkhttps://string-db.org/network/413404.Rmag_0558Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic e [...]
gmk protein networkhttps://string-db.org/network/413404.Rmag_0559Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
Rmag_0560 protein networkhttps://string-db.org/network/413404.Rmag_0560TIGRFAM: RNA polymerase sigma factor RpoH; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ilo:IL0229 DNA-directed RNA polymerase sigma 32 subunit.
groS protein networkhttps://string-db.org/network/413404.Rmag_0561Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
groL protein networkhttps://string-db.org/network/413404.Rmag_0562Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
parE protein networkhttps://string-db.org/network/413404.Rmag_0563DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circula [...]
queC protein networkhttps://string-db.org/network/413404.Rmag_0564preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
acpP protein networkhttps://string-db.org/network/413404.Rmag_0565Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
Rmag_0566 protein networkhttps://string-db.org/network/413404.Rmag_05663-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
Rmag_0567 protein networkhttps://string-db.org/network/413404.Rmag_0567Hypothetical protein.
Rmag_0568 protein networkhttps://string-db.org/network/413404.Rmag_0568PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: pha:PSHAa0361 oligopeptidase A.
metG protein networkhttps://string-db.org/network/413404.Rmag_0570methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
Rmag_0571 protein networkhttps://string-db.org/network/413404.Rmag_0571Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
Rmag_0572 protein networkhttps://string-db.org/network/413404.Rmag_0572TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: reu:Reut_A1064 ferredoxin, 2Fe-2S type.
hscA protein networkhttps://string-db.org/network/413404.Rmag_0573Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
hscB protein networkhttps://string-db.org/network/413404.Rmag_0574Co-chaperone Hsc20; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.
Rmag_0575 protein networkhttps://string-db.org/network/413404.Rmag_0575Iron-sulfur cluster assembly protein IscA; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA [...]
Rmag_0576 protein networkhttps://string-db.org/network/413404.Rmag_0576FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand [...]
iscS protein networkhttps://string-db.org/network/413404.Rmag_0577Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of eleme [...]
Rmag_0578 protein networkhttps://string-db.org/network/413404.Rmag_0578TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: tcx:Tcr_0617 transcriptional regulator, BadM/Rrf2 family.
Rmag_0579 protein networkhttps://string-db.org/network/413404.Rmag_0579TIGRFAM: serine O-acetyltransferase; KEGG: tcx:Tcr_0616 serine O-acetyltransferase.
Rmag_0580 protein networkhttps://string-db.org/network/413404.Rmag_0580PFAM: lipid A biosynthesis acyltransferase; KEGG: tcx:Tcr_0183 lipid A biosynthesis acyltransferase.
Rmag_0581 protein networkhttps://string-db.org/network/413404.Rmag_0581PFAM: PP-loop domain protein; KEGG: tcx:Tcr_0182 PP-loop; Belongs to the TtcA family.
Rmag_0582 protein networkhttps://string-db.org/network/413404.Rmag_0582KEGG: bfr:BF4142 outer membrane efflux protein.
aroK protein networkhttps://string-db.org/network/413404.Rmag_0583Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
ilvE protein networkhttps://string-db.org/network/413404.Rmag_0584Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
Rmag_0585 protein networkhttps://string-db.org/network/413404.Rmag_0585Aspartate kinase; KEGG: hch:HCH_05208 asparate kinase, monofunctional class; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino a [...]
Rmag_0586 protein networkhttps://string-db.org/network/413404.Rmag_0586Hypothetical protein.
Rmag_0587 protein networkhttps://string-db.org/network/413404.Rmag_0587PFAM: peptidase M48, Ste24p; KEGG: neu:NE0076 peptidase family M48.
Rmag_0588 protein networkhttps://string-db.org/network/413404.Rmag_0588KEGG: dar:Daro_3003 hypothetical protein.
rsgA protein networkhttps://string-db.org/network/413404.Rmag_0589Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature sub [...]
Rmag_0591 protein networkhttps://string-db.org/network/413404.Rmag_0591Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental con [...]
Rmag_0592 protein networkhttps://string-db.org/network/413404.Rmag_0592SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
cmk protein networkhttps://string-db.org/network/413404.Rmag_0593KEGG: hch:HCH_04979 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.
lysS protein networkhttps://string-db.org/network/413404.Rmag_0594TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: tcx:Tcr_0726 lysyl-tRNA synthetase; Belongs to the class-II [...]
Rmag_0595 protein networkhttps://string-db.org/network/413404.Rmag_0595Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
Rmag_0596 protein networkhttps://string-db.org/network/413404.Rmag_0596PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvu:VV12632 ATPase component of ABC transporter with duplicated ATPase domains.
Rmag_0597 protein networkhttps://string-db.org/network/413404.Rmag_0597KEGG: bms:BRA0855 hypothetical protein.
uvrC protein networkhttps://string-db.org/network/413404.Rmag_0598Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsib [...]
Rmag_0599 protein networkhttps://string-db.org/network/413404.Rmag_0599PFAM: toluene tolerance family protein; KEGG: neu:NE2381 putative signal peptide protein.
murA protein networkhttps://string-db.org/network/413404.Rmag_0600UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
hisG protein networkhttps://string-db.org/network/413404.Rmag_0601ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway [...]
hisD protein networkhttps://string-db.org/network/413404.Rmag_0602Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
ffh protein networkhttps://string-db.org/network/413404.Rmag_0604Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of [...]
Rmag_0605 protein networkhttps://string-db.org/network/413404.Rmag_0605PFAM: cytochrome c assembly protein; KEGG: mca:MCA1337 hypothetical protein.
lepA protein networkhttps://string-db.org/network/413404.Rmag_0606GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
Rmag_0607 protein networkhttps://string-db.org/network/413404.Rmag_0607PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: csa:Csal_2817 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
ubiG protein networkhttps://string-db.org/network/413404.Rmag_06083-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG [...]
Rmag_0609 protein networkhttps://string-db.org/network/413404.Rmag_0609Hypothetical protein.
acpS protein networkhttps://string-db.org/network/413404.Rmag_0610Holo-acyl-carrier-protein synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
pdxJ protein networkhttps://string-db.org/network/413404.Rmag_0611Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amin [...]
era protein networkhttps://string-db.org/network/413404.Rmag_0613GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly als [...]
rnc protein networkhttps://string-db.org/network/413404.Rmag_0614RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, a [...]
Rmag_0615 protein networkhttps://string-db.org/network/413404.Rmag_0615KEGG: tbd:Tbd_2487 hypothetical protein.
thyA protein networkhttps://string-db.org/network/413404.Rmag_0616Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate ( [...]
lgt protein networkhttps://string-db.org/network/413404.Rmag_0617Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
Rmag_0618 protein networkhttps://string-db.org/network/413404.Rmag_0618PFAM: regulatory protein, ArsR; KEGG: tcx:Tcr_1782 transcriptional regulator, ArsR family.
Rmag_0619 protein networkhttps://string-db.org/network/413404.Rmag_0619Hypothetical protein.
Rmag_0620 protein networkhttps://string-db.org/network/413404.Rmag_0620KEGG: hch:HCH_01350 periplasmic protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Belongs to the peptidase S41A family.
Rmag_0621 protein networkhttps://string-db.org/network/413404.Rmag_0621Signal peptidase I, Serine peptidase, MEROPS family S26A; KEGG: mca:MCA1465 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 famil [...]
Rmag_0622 protein networkhttps://string-db.org/network/413404.Rmag_0622DsrC family protein; Part of a sulfur-relay system.
aroA protein networkhttps://string-db.org/network/413404.Rmag_06233-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
Rmag_0624 protein networkhttps://string-db.org/network/413404.Rmag_0624PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: tcx:Tcr_1195 prephenate dehydrogenase.
hisC protein networkhttps://string-db.org/network/413404.Rmag_0625Aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: ilo:IL1358 histidinol-phosphate/aromatic aminotransferase; Belongs to the class-II [...]
Rmag_0626 protein networkhttps://string-db.org/network/413404.Rmag_0626TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: csa:Csal_2166 chorismate mutase.
Rmag_0627 protein networkhttps://string-db.org/network/413404.Rmag_0627PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: noc:Noc_0173 D-isomer specific 2-hydroxyacid dehydrogenase [...]
serC protein networkhttps://string-db.org/network/413404.Rmag_0628Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreon [...]
nrdR protein networkhttps://string-db.org/network/413404.Rmag_0631Ribonucleotide reductase regulator NrdR-like protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR [...]
glyA protein networkhttps://string-db.org/network/413404.Rmag_0632Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...]
Rmag_0635 protein networkhttps://string-db.org/network/413404.Rmag_0635PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: pfo:Pfl_4746 UBA/ThiF-type NAD/FAD binding fold.
msrA protein networkhttps://string-db.org/network/413404.Rmag_0636Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methioni [...]
Rmag_0637 protein networkhttps://string-db.org/network/413404.Rmag_0637KEGG: lpp:plpp0108 hypothetical protein.
Rmag_0638 protein networkhttps://string-db.org/network/413404.Rmag_0638Hypothetical protein.
Rmag_0639 protein networkhttps://string-db.org/network/413404.Rmag_0639PFAM: protein of unknown function UPF0118; KEGG: tcx:Tcr_1881 hypothetical protein.
Rmag_0640 protein networkhttps://string-db.org/network/413404.Rmag_0640Hypothetical protein.
Rmag_0641 protein networkhttps://string-db.org/network/413404.Rmag_0641Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as i [...]
pheT protein networkhttps://string-db.org/network/413404.Rmag_0642TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: sde:Sde_1582 phenylalanine--tRNA ligase.
pheS protein networkhttps://string-db.org/network/413404.Rmag_0643KEGG: noc:Noc_1144 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase, class IIc; aminoacyl tRNA synthetase, cla [...]
Rmag_0644 protein networkhttps://string-db.org/network/413404.Rmag_0644Hypothetical protein; KEGG: tbd:Tbd_0170 outer membrane lipoprotein, putative.
rplT protein networkhttps://string-db.org/network/413404.Rmag_0645LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing fun [...]
rpmI protein networkhttps://string-db.org/network/413404.Rmag_0646PFAM: ribosomal protein L35; KEGG: ilo:IL1397 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
infC protein networkhttps://string-db.org/network/413404.Rmag_0647Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subu [...]
thrS protein networkhttps://string-db.org/network/413404.Rmag_0648threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then tran [...]
Rmag_0649 protein networkhttps://string-db.org/network/413404.Rmag_0649Exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: lpn:lpg1461 single stranded DNA specific exonuc [...]
Rmag_0650 protein networkhttps://string-db.org/network/413404.Rmag_0650KEGG: hch:HCH_00116 hypothetical protein.
Rmag_0651 protein networkhttps://string-db.org/network/413404.Rmag_0651PFAM: FAD dependent oxidoreductase; KEGG: csa:Csal_0494 glycine oxidase ThiO.
lspA protein networkhttps://string-db.org/network/413404.Rmag_0652Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
Rmag_0654 protein networkhttps://string-db.org/network/413404.Rmag_0654Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short-chain dehydrogenase/reductase SDR; KEGG: noc:Noc_1769 short-chain dehydrogenase/reductase SDR.
Rmag_0655 protein networkhttps://string-db.org/network/413404.Rmag_0655Hypothetical protein.
Rmag_0656 protein networkhttps://string-db.org/network/413404.Rmag_0656PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: tcx:Tcr_1096 PpiC-type peptidyl-prolyl cis-trans isomerase.
ccmE protein networkhttps://string-db.org/network/413404.Rmag_0659CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by [...]
Rmag_0660 protein networkhttps://string-db.org/network/413404.Rmag_0660Hypothetical protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
ccmC protein networkhttps://string-db.org/network/413404.Rmag_0661Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
Rmag_0662 protein networkhttps://string-db.org/network/413404.Rmag_0662PFAM: peptidase M22, glycoprotease; KEGG: noc:Noc_0917 peptidase M22, glycoprotease.
Rmag_0663 protein networkhttps://string-db.org/network/413404.Rmag_0663PFAM: glycosyl transferase, family 51; KEGG: cps:CPS_4301 penicillin-binding protein.
rpsF protein networkhttps://string-db.org/network/413404.Rmag_0664SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.
rpsR protein networkhttps://string-db.org/network/413404.Rmag_0665SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial riboso [...]
rplI protein networkhttps://string-db.org/network/413404.Rmag_0666LSU ribosomal protein L9P; Binds to the 23S rRNA.
Rmag_0667 protein networkhttps://string-db.org/network/413404.Rmag_0667Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP bin [...]
Rmag_0668 protein networkhttps://string-db.org/network/413404.Rmag_0668Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
cpdA protein networkhttps://string-db.org/network/413404.Rmag_0669Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
Rmag_0670 protein networkhttps://string-db.org/network/413404.Rmag_0670PFAM: 5-nucleotidase; KEGG: noc:Noc_1810 5-nucleotidase.
hisS protein networkhttps://string-db.org/network/413404.Rmag_0671KEGG: ppu:PP0854 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein.
Rmag_0672 protein networkhttps://string-db.org/network/413404.Rmag_0672KEGG: pha:PSHAb0136 puttive membrane-associated protein with TPR-like domain.
der protein networkhttps://string-db.org/network/413404.Rmag_0673Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) [...]
pyrG protein networkhttps://string-db.org/network/413404.Rmag_0674CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...]
msbA protein networkhttps://string-db.org/network/413404.Rmag_0676ABC transporter related protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in th [...]
Rmag_0677 protein networkhttps://string-db.org/network/413404.Rmag_0677PFAM: glycosyl transferase, family 3; KEGG: tbd:Tbd_0270 anthranilate phosphoribosyltransferase-like protein.
Rmag_0678 protein networkhttps://string-db.org/network/413404.Rmag_0678PFAM: Rieske [2Fe-2S] domain protein; KEGG: tbd:Tbd_0271 putative dioxygenase ferredoxin subunit.
Rmag_0679 protein networkhttps://string-db.org/network/413404.Rmag_0679PFAM: Lytic transglycosylase, catalytic; KEGG: cps:CPS_4077 putative lipoprotein.
Rmag_0680 protein networkhttps://string-db.org/network/413404.Rmag_0680PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein.
Rmag_0682 protein networkhttps://string-db.org/network/413404.Rmag_0682KEGG: tcx:Tcr_1759 thioredoxin, putative.
ung protein networkhttps://string-db.org/network/413404.Rmag_0683Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
pdxB protein networkhttps://string-db.org/network/413404.Rmag_06844-phosphoerythronate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
Rmag_0685 protein networkhttps://string-db.org/network/413404.Rmag_0685PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: mca:MCA0590 nitrate reductase.
Rmag_0686 protein networkhttps://string-db.org/network/413404.Rmag_0686PFAM: protein kinase; protein phosphatase 2C domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: hch:HCH_05817 serine/threonine protein kinase.
Rmag_0687 protein networkhttps://string-db.org/network/413404.Rmag_0687PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_2277 conserved hypothetical nitrate transporter.
Rmag_0688 protein networkhttps://string-db.org/network/413404.Rmag_0688TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain pr [...]
Rmag_0689 protein networkhttps://string-db.org/network/413404.Rmag_0689PFAM: molybdopterin biosynthesis MoaE; KEGG: vvu:VV13084 molybdenum cofactor biosynthesis protein E.
mobA protein networkhttps://string-db.org/network/413404.Rmag_0690Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) [...]
Rmag_0691 protein networkhttps://string-db.org/network/413404.Rmag_0691Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
moaC protein networkhttps://string-db.org/network/413404.Rmag_0692GTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
moaA protein networkhttps://string-db.org/network/413404.Rmag_0693GTP cyclohydrolase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
Rmag_0694 protein networkhttps://string-db.org/network/413404.Rmag_0694Molybdopterin synthase subunit MoaD; PFAM: thiamineS protein; KEGG: dar:Daro_1784 molybdopterin converting factor, subunit 1.
Rmag_0698 protein networkhttps://string-db.org/network/413404.Rmag_0698TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: tcx:Tcr_1547 molybdopterin binding domain.
Rmag_0699 protein networkhttps://string-db.org/network/413404.Rmag_0699PFAM: von Willebrand factor, type A; KEGG: tcx:Tcr_0422 von Willebrand factor, type A.
Rmag_0700 protein networkhttps://string-db.org/network/413404.Rmag_0700CbbQ/NirQ/NorQ C-terminal domain protein; PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; SMART: AAA ATPase; KEGG: tcx:Tcr_0423 ATPase a [...]
Rmag_0701 protein networkhttps://string-db.org/network/413404.Rmag_0701Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: tcx:Tcr_0424 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO l [...]
argJ protein networkhttps://string-db.org/network/413404.Rmag_0704Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the [...]
Rmag_0705 protein networkhttps://string-db.org/network/413404.Rmag_0705PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO0315 iron ABC transporter, permease protein.
Rmag_0706 protein networkhttps://string-db.org/network/413404.Rmag_0706PFAM: extracellular solute-binding protein, family 1; KEGG: tbd:Tbd_0990 ABC transporter, iron binding protein.
Rmag_0707 protein networkhttps://string-db.org/network/413404.Rmag_0707PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA4892 probable transport system ATP-binding protein.
Rmag_0708 protein networkhttps://string-db.org/network/413404.Rmag_0708Cell division protein SufI; PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: tcx:Tcr_1576 bilirubin oxidase.
Rmag_0710 protein networkhttps://string-db.org/network/413404.Rmag_0710Hypothetical protein.
Rmag_0711 protein networkhttps://string-db.org/network/413404.Rmag_0711PFAM: protein of unknown function DUF1111; KEGG: pae:PA4371 hypothetical protein.
Rmag_0712 protein networkhttps://string-db.org/network/413404.Rmag_0712Imelysin, Metallo peptidase, MEROPS family M75; KEGG: vpa:VP1920 putative iron-regulated protein A.
Rmag_0714 protein networkhttps://string-db.org/network/413404.Rmag_0714TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: lpf:lpl2012 hypothetical protein.
Rmag_0716 protein networkhttps://string-db.org/network/413404.Rmag_0716TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tcx:Tcr_1385 thioredoxin; Belongs to the thioredoxin family.
Rmag_0717 protein networkhttps://string-db.org/network/413404.Rmag_0717TIGRFAM: conserved hypothetical protein; PFAM: arsenate reductase and related; KEGG: pha:PSHAa1332 enzyme with thioredoxin-like domain; Belongs to the ArsC family.
Rmag_0718 protein networkhttps://string-db.org/network/413404.Rmag_0718KEGG: tcx:Tcr_0163 hypothetical protein.
Rmag_0719 protein networkhttps://string-db.org/network/413404.Rmag_0719Hypothetical protein.
glyS protein networkhttps://string-db.org/network/413404.Rmag_0721KEGG: cbu:CBU_1914 glycyl-tRNA synthetase, beta subunit.
Rmag_0722 protein networkhttps://string-db.org/network/413404.Rmag_0722KEGG: noc:Noc_2908 hypothetical protein.
Rmag_0723 protein networkhttps://string-db.org/network/413404.Rmag_0723Cell division and transport-associated protein TolA; KEGG: tcx:Tcr_0897 TolA; TC 2.C.1.2.1.
tolR protein networkhttps://string-db.org/network/413404.Rmag_0724Cell division and transport-associated protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer memb [...]
Rmag_0725 protein networkhttps://string-db.org/network/413404.Rmag_0725Cell division and transport-associated protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ilo:IL1083 TonB system biopolymer transport component; TC 2.C.1.2.1.
Rmag_0729 protein networkhttps://string-db.org/network/413404.Rmag_0729Hypothetical protein.
hemA protein networkhttps://string-db.org/network/413404.Rmag_0730glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
prfA protein networkhttps://string-db.org/network/413404.Rmag_0731Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
Rmag_0732 protein networkhttps://string-db.org/network/413404.Rmag_0732PFAM: ABC-3 protein; KEGG: ppr:PBPRA1053 putative ABC-type Mn2+/Zn2+ transport system, permease component.
fur protein networkhttps://string-db.org/network/413404.Rmag_0733Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: noc:Noc_1194 ferric-uptake regulator; Belongs to the Fur family.
bamE protein networkhttps://string-db.org/network/413404.Rmag_0734SmpA/OmlA domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
Rmag_0735 protein networkhttps://string-db.org/network/413404.Rmag_0735PFAM: peptidase S49; KEGG: tcx:Tcr_1144 peptidase S49.
ccmA protein networkhttps://string-db.org/network/413404.Rmag_0736Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact r [...]
Rmag_0737 protein networkhttps://string-db.org/network/413404.Rmag_0737Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
metK protein networkhttps://string-db.org/network/413404.Rmag_0738Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet format [...]
Rmag_0739 protein networkhttps://string-db.org/network/413404.Rmag_0739KEGG: hch:HCH_01532 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase.
glyQ protein networkhttps://string-db.org/network/413404.Rmag_0740PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: tcx:Tcr_0354 glycyl-tRNA synthetase, alpha subunit.
Rmag_0741 protein networkhttps://string-db.org/network/413404.Rmag_0741KEGG: ilo:IL0747 hypothetical protein.
Rmag_0742 protein networkhttps://string-db.org/network/413404.Rmag_0742PFAM: MscS Mechanosensitive ion channel; KEGG: vfi:VFA0405 mechanosensitive ion channel.
miaB protein networkhttps://string-db.org/network/413404.Rmag_0743tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) [...]
Rmag_0744 protein networkhttps://string-db.org/network/413404.Rmag_0744PFAM: electron transport protein SCO1/SenC; KEGG: rbe:RBE_0699 Sco2 protein precursor.
Rmag_0745 protein networkhttps://string-db.org/network/413404.Rmag_0745PFAM: protein of unknown function DUF461; KEGG: dar:Daro_1578 protein of unknown function DUF461.
mnmA protein networkhttps://string-db.org/network/413404.Rmag_0747tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
hflD protein networkhttps://string-db.org/network/413404.Rmag_0748PFAM: protein of unknown function DUF489; KEGG: hch:HCH_02332 uncharacterized protein involved in purine metabolism.
rpsT protein networkhttps://string-db.org/network/413404.Rmag_0749SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.
xseA protein networkhttps://string-db.org/network/413404.Rmag_0750Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
Rmag_0751 protein networkhttps://string-db.org/network/413404.Rmag_0751PFAM: peptidase M23B; KEGG: psp:PSPPH_1330 peptidase, M23/M37 family.
Rmag_0752 protein networkhttps://string-db.org/network/413404.Rmag_0752PFAM: RDD domain containing protein; KEGG: nmu:Nmul_A1054 RDD.
Rmag_0753 protein networkhttps://string-db.org/network/413404.Rmag_0753Hypothetical protein.
Rmag_0754 protein networkhttps://string-db.org/network/413404.Rmag_0754Cell division protein FtsB; PFAM: Septum formation initiator.
ispD protein networkhttps://string-db.org/network/413404.Rmag_07552-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
Rmag_0756 protein networkhttps://string-db.org/network/413404.Rmag_07562C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...]
murC protein networkhttps://string-db.org/network/413404.Rmag_0757UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
murB protein networkhttps://string-db.org/network/413404.Rmag_0758UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
ddl protein networkhttps://string-db.org/network/413404.Rmag_0759D-alanine--D-alanine ligase; Cell wall formation.
Rmag_0760 protein networkhttps://string-db.org/network/413404.Rmag_0760KEGG: pfo:Pfl_4670 cell division protein FtsQ.
Rmag_0761 protein networkhttps://string-db.org/network/413404.Rmag_0761Hypothetical protein.
Rmag_0762 protein networkhttps://string-db.org/network/413404.Rmag_0762PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; KEGG: cps:CPS_1998 putative membrane-bound lytic murein transglycosylase.
Rmag_0763 protein networkhttps://string-db.org/network/413404.Rmag_0763PFAM: BolA family protein; KEGG: pha:PSHAa2243 regulator protein; Belongs to the BolA/IbaG family.
Rmag_0764 protein networkhttps://string-db.org/network/413404.Rmag_0764PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Ferric reductase, NAD binding; KEGG: tbd:Tbd_2563 NAD(P)H-flavin reductase.
miaA protein networkhttps://string-db.org/network/413404.Rmag_0765tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to th [...]
murD protein networkhttps://string-db.org/network/413404.Rmag_0766UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF [...]
Rmag_0767 protein networkhttps://string-db.org/network/413404.Rmag_0767PFAM: protein of unknown function UPF0005; KEGG: tbd:Tbd_0489 hypothetical protein; Belongs to the BI1 family.
rppH protein networkhttps://string-db.org/network/413404.Rmag_0768NUDIX hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulat [...]
Rmag_0769 protein networkhttps://string-db.org/network/413404.Rmag_0769PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; KEGG: mca:MCA0597 homoserine dehydrogenase.
Rmag_0770 protein networkhttps://string-db.org/network/413404.Rmag_0770L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
Rmag_0771 protein networkhttps://string-db.org/network/413404.Rmag_0771KEGG: xoo:XOO4599 hypothetical protein.
Rmag_0772 protein networkhttps://string-db.org/network/413404.Rmag_0772TIGRFAM: cysteine synthases; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: noc:Noc_0797 cysteine synthase; Belongs to the cysteine synthase/cystathionine [...]
Rmag_0773 protein networkhttps://string-db.org/network/413404.Rmag_0773PFAM: Cl- channel, voltage-gated family protein; KEGG: rpa:RPA3953 putative chloride channel protein.
Rmag_0774 protein networkhttps://string-db.org/network/413404.Rmag_0774PFAM: conserved hypothetical protein 701; KEGG: hch:HCH_06247 predicted membrane protein.
Rmag_0776 protein networkhttps://string-db.org/network/413404.Rmag_0776KEGG: bur:Bcep18194_C6923 hypothetical protein.
Rmag_0777 protein networkhttps://string-db.org/network/413404.Rmag_0777PFAM: peptidase M16 domain protein; KEGG: tcx:Tcr_1940 peptidase M16-like.
Rmag_0778 protein networkhttps://string-db.org/network/413404.Rmag_0778PFAM: peptidase M16 domain protein; KEGG: mca:MCA0063 peptidase, M16 family; Belongs to the peptidase M16 family.
ftsY protein networkhttps://string-db.org/network/413404.Rmag_0781Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...]
hemC protein networkhttps://string-db.org/network/413404.Rmag_0783Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
argH protein networkhttps://string-db.org/network/413404.Rmag_0784TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: sde:Sde_3670 response regulator receiver domain protein (CheY-like).
fmt protein networkhttps://string-db.org/network/413404.Rmag_0785methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
trmL protein networkhttps://string-db.org/network/413404.Rmag_0786tRNA/rRNA methyltransferase (SpoU); Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transf [...]
clpB protein networkhttps://string-db.org/network/413404.Rmag_0787ATPase AAA-2 domain protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs [...]
rnfE protein networkhttps://string-db.org/network/413404.Rmag_0788Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
Rmag_0790 protein networkhttps://string-db.org/network/413404.Rmag_0790[protein release factor]-glutamine N5-methyltransferase; TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: tcx:Tcr_0388 modification methylase, HemK family.
Rmag_0793 protein networkhttps://string-db.org/network/413404.Rmag_0793Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
Rmag_0794 protein networkhttps://string-db.org/network/413404.Rmag_0794TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: cbu:CBU_1471 rod shape-determining protein MreB.
Rmag_0795 protein networkhttps://string-db.org/network/413404.Rmag_0795TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: hch:HCH_05333 rod shape-determining protein MreC.
Rmag_0796 protein networkhttps://string-db.org/network/413404.Rmag_0796KEGG: pfo:Pfl_0840 rod shape-determining protein MreD.
mrdA protein networkhttps://string-db.org/network/413404.Rmag_0797Peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
Rmag_0799 protein networkhttps://string-db.org/network/413404.Rmag_0799PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3493 ABC transporter related.
Rmag_0800 protein networkhttps://string-db.org/network/413404.Rmag_08005-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; I [...]
Rmag_0801 protein networkhttps://string-db.org/network/413404.Rmag_0801Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcystei [...]
Rmag_0803 protein networkhttps://string-db.org/network/413404.Rmag_0803KEGG: noc:Noc_0846 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: ph [...]
Rmag_0804 protein networkhttps://string-db.org/network/413404.Rmag_0804Hypothetical protein.
Rmag_0805 protein networkhttps://string-db.org/network/413404.Rmag_0805Diheme cytochrome SoxA (sulfur oxidation); KEGG: tcx:Tcr_0601 sulfur oxidation protein SoxA.
Rmag_0806 protein networkhttps://string-db.org/network/413404.Rmag_0806Sulfur compound chelating protein SoxZ; KEGG: bja:bll1012 sulfur oxidation protein.
Rmag_0807 protein networkhttps://string-db.org/network/413404.Rmag_0807KEGG: tcx:Tcr_0603 sulfur oxidation protein SoxY-like.
Rmag_0808 protein networkhttps://string-db.org/network/413404.Rmag_0808Monoheme cytochrome SoxX (sulfur oxidation); KEGG: tbd:Tbd_0567 sulfur oxidation protein SoxX.
trpE protein networkhttps://string-db.org/network/413404.Rmag_0809Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first [...]
rpoC protein networkhttps://string-db.org/network/413404.Rmag_0810DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoB protein networkhttps://string-db.org/network/413404.Rmag_0811DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplL protein networkhttps://string-db.org/network/413404.Rmag_0812LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bact [...]
rplJ protein networkhttps://string-db.org/network/413404.Rmag_0813LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal pro [...]
rplA protein networkhttps://string-db.org/network/413404.Rmag_0814LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplK protein networkhttps://string-db.org/network/413404.Rmag_0815LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
nusG protein networkhttps://string-db.org/network/413404.Rmag_0816Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.
secE protein networkhttps://string-db.org/network/413404.Rmag_0817Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during transloc [...]
tuf2 protein networkhttps://string-db.org/network/413404.Rmag_0818Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
Rmag_0819 protein networkhttps://string-db.org/network/413404.Rmag_0819Malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: hch:HCH_05974 malic enzyme.
gcvP protein networkhttps://string-db.org/network/413404.Rmag_0821Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal [...]
Rmag_0822 protein networkhttps://string-db.org/network/413404.Rmag_0822PFAM: histidine triad (HIT) protein; KEGG: csa:Csal_0911 histidine triad (HIT) protein.
Rmag_0824 protein networkhttps://string-db.org/network/413404.Rmag_0824PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tcx:Tcr_1381 sulfide-quinone reductase.
Rmag_0825 protein networkhttps://string-db.org/network/413404.Rmag_0825PFAM: nitroreductase; KEGG: reu:Reut_A1045 nitroreductase.
Rmag_0826 protein networkhttps://string-db.org/network/413404.Rmag_0826PFAM: beta-lactamase domain protein; KEGG: dre:405865 zgc:85680.
dapB protein networkhttps://string-db.org/network/413404.Rmag_0828Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
kdsA protein networkhttps://string-db.org/network/413404.Rmag_0831TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: tcx:Tcr_1261 2-dehydro-3-deoxyphosphooctonate aldolase.
trpC protein networkhttps://string-db.org/network/413404.Rmag_0832PFAM: Indole-3-glycerol phosphate synthase; KEGG: tcx:Tcr_0269 indole-3-glycerol-phosphate synthase; Belongs to the TrpC family.
Rmag_0833 protein networkhttps://string-db.org/network/413404.Rmag_0833PFAM: OsmC family protein; KEGG: mfa:Mfla_0380 OsmC-like protein.
thiG protein networkhttps://string-db.org/network/413404.Rmag_0834Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate mo [...]
Rmag_0835 protein networkhttps://string-db.org/network/413404.Rmag_08358-amino-7-oxononanoate synthase; PFAM: aminotransferase, class I and II; KEGG: pfl:PFL_5692 8-amino-7-oxononanoate synthase.
Rmag_0836 protein networkhttps://string-db.org/network/413404.Rmag_0836Carboxylesterase BioH (pimeloyl-CoA synthesis); PFAM: alpha/beta hydrolase fold; KEGG: sdn:Sden_3530 BioH protein.
purE protein networkhttps://string-db.org/network/413404.Rmag_08375-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
purK protein networkhttps://string-db.org/network/413404.Rmag_08385-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAI [...]
Rmag_0839 protein networkhttps://string-db.org/network/413404.Rmag_0839PFAM: glutaredoxin; KEGG: pha:PSHAa0634 glutaredoxin.
folD protein networkhttps://string-db.org/network/413404.Rmag_08405,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then [...]
kdsB protein networkhttps://string-db.org/network/413404.Rmag_08413-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
Rmag_0842 protein networkhttps://string-db.org/network/413404.Rmag_0842PFAM: protein of unknown function DUF343; KEGG: tfu:Tfu_2509 hypothetical protein; Belongs to the UPF0434 family.
lpxK protein networkhttps://string-db.org/network/413404.Rmag_0843lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-pho [...]
Rmag_0844 protein networkhttps://string-db.org/network/413404.Rmag_0844TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mfa:Mfla_2095 lipoprotein releasing system, transmembrane protein, Lol [...]
lolD protein networkhttps://string-db.org/network/413404.Rmag_0845ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmi [...]
panD protein networkhttps://string-db.org/network/413404.Rmag_0846Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
Rmag_0847 protein networkhttps://string-db.org/network/413404.Rmag_0847Sodium ion-translocating decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family.
Rmag_0848 protein networkhttps://string-db.org/network/413404.Rmag_0848TIGRFAM: oxaloacetate decarboxylase alpha subunit; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: pha:PSHAa0539 oxaloa [...]
Rmag_0849 protein networkhttps://string-db.org/network/413404.Rmag_0849Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
infA protein networkhttps://string-db.org/network/413404.Rmag_0850Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-f [...]
Rmag_0851 protein networkhttps://string-db.org/network/413404.Rmag_0851KEGG: reu:Reut_A0215 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofola [...]
Rmag_0852 protein networkhttps://string-db.org/network/413404.Rmag_0852Hypothetical protein.
Rmag_0853 protein networkhttps://string-db.org/network/413404.Rmag_0853Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
Rmag_0854 protein networkhttps://string-db.org/network/413404.Rmag_0854Hypothetical protein.
Rmag_0855 protein networkhttps://string-db.org/network/413404.Rmag_0855TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: tcx:Tcr_0977 K+-dependent Na+/Ca+ exchanger related-protein.
Rmag_0856 protein networkhttps://string-db.org/network/413404.Rmag_0856PFAM: protein of unknown function UPF0079; KEGG: msu:MS1514 predicted ATPase or kinase.
Rmag_0858 protein networkhttps://string-db.org/network/413404.Rmag_0858TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: HesB/YadR/YfhF-family protein; Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: tbd:Tbd_2473 cob [...]
Rmag_0859 protein networkhttps://string-db.org/network/413404.Rmag_0859PFAM: Polysulphide reductase, NrfD; KEGG: tbd:Tbd_2474 molybdopterin oxidoreductase, membrane subunit.
Rmag_0860 protein networkhttps://string-db.org/network/413404.Rmag_0860TIGRFAM: Twin-arginine translocation pathway signal; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tbd:Tbd_2475 iron-sulfur cluster protein.
Rmag_0861 protein networkhttps://string-db.org/network/413404.Rmag_0861Hypothetical protein; KEGG: mag:amb3376 Hdr-like menaquinol oxidoreductase cytochrome c subunit.
Rmag_0862 protein networkhttps://string-db.org/network/413404.Rmag_0862PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mag:amb3375 NADPH-dependent glutamate synthase beta chain and relat [...]
Rmag_0863 protein networkhttps://string-db.org/network/413404.Rmag_0863PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: tbd:Tbd_2478 reductase, iron-sulfur binding subunit, putative.
Rmag_0864 protein networkhttps://string-db.org/network/413404.Rmag_0864PFAM: Nitrate reductase, gamma subunit; KEGG: tbd:Tbd_2479 putative DsrM protein.
Rmag_0865 protein networkhttps://string-db.org/network/413404.Rmag_0865DsrC family protein; Part of a sulfur-relay system.
Rmag_0866 protein networkhttps://string-db.org/network/413404.Rmag_0866PFAM: DsrH family protein; KEGG: tbd:Tbd_2481 DsrH protein.
Rmag_0867 protein networkhttps://string-db.org/network/413404.Rmag_0867PFAM: DsrE family protein; KEGG: mag:amb3370 uncharacterized protein involved in the oxidation of intracellular sulfur; Belongs to the DsrF/TusC family.
Rmag_0868 protein networkhttps://string-db.org/network/413404.Rmag_0868PFAM: DsrE family protein; KEGG: mag:amb3369 intracellular sulfur oxidation protein DsrE.
Rmag_0869 protein networkhttps://string-db.org/network/413404.Rmag_0869KEGG: tbd:Tbd_2484 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ni [...]
Rmag_0870 protein networkhttps://string-db.org/network/413404.Rmag_0870KEGG: tbd:Tbd_2485 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
Rmag_0871 protein networkhttps://string-db.org/network/413404.Rmag_0871TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rba:RB5653 NADH-glutamate synthase small chain.
rplS protein networkhttps://string-db.org/network/413404.Rmag_0872LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
greA protein networkhttps://string-db.org/network/413404.Rmag_0874Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
carB protein networkhttps://string-db.org/network/413404.Rmag_0875TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate syn [...]
Rmag_0876 protein networkhttps://string-db.org/network/413404.Rmag_0876PFAM: VacJ family lipoprotein; KEGG: noc:Noc_2787 VacJ-like lipoprotein.
carA protein networkhttps://string-db.org/network/413404.Rmag_0877TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; KEGG: vfi:VF0472 carbamoyl-phosphate synthase small chai [...]
Rmag_0878 protein networkhttps://string-db.org/network/413404.Rmag_0878KEGG: tcx:Tcr_0383 heavy metal transport/detoxification protein.
Rmag_0879 protein networkhttps://string-db.org/network/413404.Rmag_0879TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: csa:Csal_3147 thiamine biosynthesis protein ThiS.
Rmag_0880 protein networkhttps://string-db.org/network/413404.Rmag_0880KEGG: noc:Noc_2654 hypothetical protein.
Rmag_0881 protein networkhttps://string-db.org/network/413404.Rmag_0881Sulfite reductase, gamma subunit-related protein; Part of a sulfur-relay system.
alaS protein networkhttps://string-db.org/network/413404.Rmag_0882alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
glmS protein networkhttps://string-db.org/network/413404.Rmag_0883Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
pgi protein networkhttps://string-db.org/network/413404.Rmag_0884PFAM: phosphoglucose isomerase (PGI); KEGG: tdn:Tmden_1472 glucose-6-phosphate isomerase; Belongs to the GPI family.
Rmag_0885 protein networkhttps://string-db.org/network/413404.Rmag_0885UDP-glucose pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: tdn:Tmden_1473 UTP--glucose-1-phosphate uridylyltransferase.
Rmag_0886 protein networkhttps://string-db.org/network/413404.Rmag_0886Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynt [...]
Rmag_0887 protein networkhttps://string-db.org/network/413404.Rmag_0887PFAM: sugar transferase; KEGG: dar:Daro_1277 sugar transferase.
Rmag_0889 protein networkhttps://string-db.org/network/413404.Rmag_0889PFAM: glycosyl transferase, family 2; KEGG: hpy:HP0102 hypothetical protein.
Rmag_0890 protein networkhttps://string-db.org/network/413404.Rmag_0890PFAM: glycosyl transferase, group 1; KEGG: dge:Dgeo_2669 glycosyl transferase, group 1.
Rmag_0891 protein networkhttps://string-db.org/network/413404.Rmag_0891PFAM: glycosyl transferase, family 2; KEGG: hpy:HP0102 hypothetical protein.
Rmag_0892 protein networkhttps://string-db.org/network/413404.Rmag_0892KEGG: cpe:CPE0622 hypothetical protein.
Rmag_0893 protein networkhttps://string-db.org/network/413404.Rmag_0893Glycerol-3-phosphate cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; KEGG: msu:MS0658 cytidylyltransferase.
Rmag_0894 protein networkhttps://string-db.org/network/413404.Rmag_0894KEGG: ava:Ava_1042 methyltransferase FkbM.
Rmag_0895 protein networkhttps://string-db.org/network/413404.Rmag_0895Hypothetical protein.
Rmag_0896 protein networkhttps://string-db.org/network/413404.Rmag_0896Hypothetical protein; KEGG: pub:SAR11_0530 cyclopropane-fatty-acyl-phospholipid synthase (CMAS family).
Rmag_0897 protein networkhttps://string-db.org/network/413404.Rmag_0897KEGG: pmi:PMT9312_1328 hypothetical protein.
Rmag_0898 protein networkhttps://string-db.org/network/413404.Rmag_0898KEGG: mth:MTH1523 glucose-1-phosphate adenylyltransferase related protein.
Rmag_0899 protein networkhttps://string-db.org/network/413404.Rmag_0899KEGG: lmf:LMOf2365_0663 hypothetical protein.
Rmag_0900 protein networkhttps://string-db.org/network/413404.Rmag_0900KEGG: aae:aq_2171 putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
Rmag_0901 protein networkhttps://string-db.org/network/413404.Rmag_0901PFAM: polysaccharide biosynthesis protein; KEGG: cch:Cag_0665 probable polysaccharide biosynthesis protein.
fcl protein networkhttps://string-db.org/network/413404.Rmag_0902NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
gmd protein networkhttps://string-db.org/network/413404.Rmag_0903GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
Rmag_0904 protein networkhttps://string-db.org/network/413404.Rmag_0904Mannose-6-phosphate isomerase, type 2; KEGG: csa:Csal_1692 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosph [...]
Rmag_0908 protein networkhttps://string-db.org/network/413404.Rmag_0908PFAM: O-antigen polymerase; KEGG: hin:HI0874 hypothetical protein.
Rmag_0909 protein networkhttps://string-db.org/network/413404.Rmag_0909KEGG: tcx:Tcr_0922 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic.
surE protein networkhttps://string-db.org/network/413404.Rmag_09105'-nucleotidase / 3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
Rmag_0911 protein networkhttps://string-db.org/network/413404.Rmag_0911ATP-dependent Clp protease ATP-binding subunit ClpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA [...]
clpS protein networkhttps://string-db.org/network/413404.Rmag_0912ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
Rmag_0913 protein networkhttps://string-db.org/network/413404.Rmag_0913PFAM: permease YjgP/YjgQ family protein; KEGG: noc:Noc_1909 permease YjgP/YjgQ.
guaA protein networkhttps://string-db.org/network/413404.Rmag_0914GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
tadA protein networkhttps://string-db.org/network/413404.Rmag_0915CMP/dCMP deaminase, zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
Rmag_0916 protein networkhttps://string-db.org/network/413404.Rmag_09163-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
Rmag_0917 protein networkhttps://string-db.org/network/413404.Rmag_0917[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; KEGG: tcx:Tcr_0711 malonyl CoA-acyl carrier protein transacylase.
rpmA protein networkhttps://string-db.org/network/413404.Rmag_0918PFAM: ribosomal protein L27; KEGG: vch:VC0436 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
rplU protein networkhttps://string-db.org/network/413404.Rmag_0919LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
Rmag_0920 protein networkhttps://string-db.org/network/413404.Rmag_0920Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belon [...]
lpxH protein networkhttps://string-db.org/network/413404.Rmag_0921UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water [...]
Rmag_0922 protein networkhttps://string-db.org/network/413404.Rmag_0922PFAM: ribonuclease II; KEGG: ftu:FTT0257 ribonuclease II family protein.
gcvH protein networkhttps://string-db.org/network/413404.Rmag_0923Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
gcvT protein networkhttps://string-db.org/network/413404.Rmag_0924Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
Rmag_0925 protein networkhttps://string-db.org/network/413404.Rmag_0925Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
Rmag_0926 protein networkhttps://string-db.org/network/413404.Rmag_0926Hypothetical protein.
Rmag_0927 protein networkhttps://string-db.org/network/413404.Rmag_0927TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: sde:Sde_3698 peptidase S1C, Do.
Rmag_0928 protein networkhttps://string-db.org/network/413404.Rmag_0928ATP-dependent DNA helicase RecG; PFAM: helicase domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; DEAD/DEAH box helicase domain protein; KEGG: csa:Csal_3245 ATP-dependent DNA hel [...]
ubiC protein networkhttps://string-db.org/network/413404.Rmag_0929Chorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.
cmoA protein networkhttps://string-db.org/network/413404.Rmag_0930Putative methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
Rmag_0931 protein networkhttps://string-db.org/network/413404.Rmag_0931Anthranilate synthase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: hch:HCH_06126 anthranilate/para-aminobenzoate sy [...]
Rmag_0932 protein networkhttps://string-db.org/network/413404.Rmag_0932PFAM: Rhodanese domain protein; KEGG: tbd:Tbd_2399 rhodanese-like protein.
Rmag_0933 protein networkhttps://string-db.org/network/413404.Rmag_0933PFAM: glutaredoxin; KEGG: wol:WD0758 glutaredoxin family protein.
gpsA protein networkhttps://string-db.org/network/413404.Rmag_0934PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: ilo:IL0236 glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
rpsI protein networkhttps://string-db.org/network/413404.Rmag_0935PFAM: ribosomal protein S9; KEGG: cps:CPS_4442 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
rplM protein networkhttps://string-db.org/network/413404.Rmag_0936LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stage [...]
Rmag_0937 protein networkhttps://string-db.org/network/413404.Rmag_0937phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase; PFAM: sulfatase; protein of unknown function DUF1705; KEGG: pfo:Pfl_3156 hypothetical protein.
Rmag_0939 protein networkhttps://string-db.org/network/413404.Rmag_0939PFAM: Redoxin domain protein; KEGG: tcx:Tcr_0234 hypothetical protein.
deaD protein networkhttps://string-db.org/network/413404.Rmag_0942ATP-dependent RNA helicase CsdA; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
Rmag_0944 protein networkhttps://string-db.org/network/413404.Rmag_0944PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bca:BCE5298 cold shock protein CspC.
Rmag_0946 protein networkhttps://string-db.org/network/413404.Rmag_0946KEGG: ppr:PBPRA1693 putative exonuclease I; PFAM: Exonuclease, RNase T and DNA polymerase III; Exonuclease C-terminal domain protein; SMART: Exonuclease.
nth protein networkhttps://string-db.org/network/413404.Rmag_0947DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines fr [...]
Rmag_0948 protein networkhttps://string-db.org/network/413404.Rmag_0948Fructosamine kinase; PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: ath:At3g61080 fructosamine kinase family protein.
hisH protein networkhttps://string-db.org/network/413404.Rmag_0949Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glu [...]
hisB protein networkhttps://string-db.org/network/413404.Rmag_0950PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: bpm:BURPS1710b_3691 imidazoleglycerol-phosphate dehydratase.
asd protein networkhttps://string-db.org/network/413404.Rmag_0951Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the as [...]
Rmag_0952 protein networkhttps://string-db.org/network/413404.Rmag_0952PFAM: protein of unknown function DUF34; KEGG: nmu:Nmul_A0806 protein of unknown function DUF34.
hisC-2 protein networkhttps://string-db.org/network/413404.Rmag_0953TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; Allinase-like; KEGG: neu:NE0647 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-ph [...]
Rmag_0954 protein networkhttps://string-db.org/network/413404.Rmag_0954PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ppu:PP4782 phosphomethylpyrimidine kinase.
Rmag_0955 protein networkhttps://string-db.org/network/413404.Rmag_0955PFAM: DSBA oxidoreductase; KEGG: mca:MCA2602 thiol:disulfide interchange protein DsbA.
Rmag_0956 protein networkhttps://string-db.org/network/413404.Rmag_0956TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: noc:Noc_0038 7,8-dihydro-6-hydroxymethylpterin [...]
Rmag_0957 protein networkhttps://string-db.org/network/413404.Rmag_0957Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
plsY protein networkhttps://string-db.org/network/413404.Rmag_0958Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). Th [...]
Rmag_0960 protein networkhttps://string-db.org/network/413404.Rmag_0960PFAM: ABC-2 type transporter; KEGG: ppr:PBPRA3177 putative permease.
Rmag_0961 protein networkhttps://string-db.org/network/413404.Rmag_0961PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ilo:IL2259 ABC-type multidrug transport system, ATPase component.
Rmag_0962 protein networkhttps://string-db.org/network/413404.Rmag_0962PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ftl:FTL_0310 pyruvate dehydrogenase, [...]
Rmag_0963 protein networkhttps://string-db.org/network/413404.Rmag_0963TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dim [...]
Rmag_0964 protein networkhttps://string-db.org/network/413404.Rmag_0964PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: dar:Daro_3924 protein-L-isoaspartate(D-aspartate) O-methyltransferase:O-methyltransferase, family 3 [...]
Rmag_0965 protein networkhttps://string-db.org/network/413404.Rmag_0965KEGG: sde:Sde_3357 putative integral membrane protein.
Rmag_0966 protein networkhttps://string-db.org/network/413404.Rmag_0966L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
def protein networkhttps://string-db.org/network/413404.Rmag_0967Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
Rmag_0968 protein networkhttps://string-db.org/network/413404.Rmag_0968DNA-binding protein Fis; PFAM: helix-turn-helix, Fis-type; KEGG: mfa:Mfla_0350 helix-turn-helix, fis-type.
purH protein networkhttps://string-db.org/network/413404.Rmag_0969KEGG: tcx:Tcr_0439 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICAR [...]
Rmag_0971 protein networkhttps://string-db.org/network/413404.Rmag_0971PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: csa:Csal_0021 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
Rmag_0972 protein networkhttps://string-db.org/network/413404.Rmag_0972TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: tcx:Tcr_1557 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family.
Rmag_0973 protein networkhttps://string-db.org/network/413404.Rmag_0973Microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62; PFAM: peptidase U62, modulator of DNA gyrase; KEGG: mca:MCA0383 PmbA protein.
Rmag_0974 protein networkhttps://string-db.org/network/413404.Rmag_0974KEGG: tcx:Tcr_0203 hypothetical protein.
Rmag_0975 protein networkhttps://string-db.org/network/413404.Rmag_0975PFAM: CBS domain containing protein; transporter-associated region; KEGG: hch:HCH_05351 putative Mg2+ and Co2+ transporter CorC.
Rmag_0976 protein networkhttps://string-db.org/network/413404.Rmag_0976PFAM: protein of unknown function UPF0125; KEGG: dar:Daro_2340 hypothetical protein; Belongs to the UPF0125 (RnfH) family.
hisA protein networkhttps://string-db.org/network/413404.Rmag_09771-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: sde:Sde_0489 response regulator receiver domain protein (CheY-like); TIGRFAM: phosphorib [...]
Rmag_0978 protein networkhttps://string-db.org/network/413404.Rmag_0978PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ilo:IL1434 lactoylglutathione lyase.
tsaD protein networkhttps://string-db.org/network/413404.Rmag_0980O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in t [...]
Rmag_0981 protein networkhttps://string-db.org/network/413404.Rmag_0981PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA4461 probable ATP-binding component of ABC transporter.
Rmag_0982 protein networkhttps://string-db.org/network/413404.Rmag_0982TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: cbu:CBU_1002 birA bifunctional protein.
Rmag_0983 protein networkhttps://string-db.org/network/413404.Rmag_0983Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
truA protein networkhttps://string-db.org/network/413404.Rmag_0984tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
metE protein networkhttps://string-db.org/network/413404.Rmag_0985Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 indepe [...]
Rmag_0986 protein networkhttps://string-db.org/network/413404.Rmag_0986Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_B0361 transcriptional regulator, LysR family.
Rmag_0987 protein networkhttps://string-db.org/network/413404.Rmag_0987PFAM: Citrate transporter; TrkA-C domain protein; KEGG: sru:SRU_1767 putative sodium-dependent transporter.
Rmag_0988 protein networkhttps://string-db.org/network/413404.Rmag_0988PFAM: carbonic anhydrase; KEGG: aci:ACIAD1056 putative carbonic anhydrase.
rimM protein networkhttps://string-db.org/network/413404.Rmag_098916S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
rpsP protein networkhttps://string-db.org/network/413404.Rmag_0990PFAM: ribosomal protein S16; KEGG: lpp:lpp0466 hypothetical protein; Belongs to the bacterial ribosomal protein bS16 family.
Rmag_0991 protein networkhttps://string-db.org/network/413404.Rmag_0991KEGG: sde:Sde_1675 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase C-terminal domain protein; Belongs to the lyase 1 family. Adenylosuccinate [...]
Rmag_0992 protein networkhttps://string-db.org/network/413404.Rmag_0992Aconitase; PFAM: aconitate hydratase domain protein; aconitate hydratase 2; KEGG: noc:Noc_2103 aconitate hydratase; Belongs to the aconitase/IPM isomerase family.
rpmG protein networkhttps://string-db.org/network/413404.Rmag_0993PFAM: ribosomal protein L33; KEGG: hch:HCH_01018 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
rpmB protein networkhttps://string-db.org/network/413404.Rmag_0994PFAM: ribosomal protein L28; KEGG: sde:Sde_3679 50S ribosomal subunit protein L28; Belongs to the bacterial ribosomal protein bL28 family.
pyrE protein networkhttps://string-db.org/network/413404.Rmag_0995Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
Rmag_0996 protein networkhttps://string-db.org/network/413404.Rmag_0996KEGG: mca:MCA0321 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.
trmB protein networkhttps://string-db.org/network/413404.Rmag_0997tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
Rmag_0998 protein networkhttps://string-db.org/network/413404.Rmag_0998PFAM: FxsA cytoplasmic membrane protein; KEGG: pha:PSHAa0261 F exclusion suppressor.
Rmag_0999 protein networkhttps://string-db.org/network/413404.Rmag_0999FolC bifunctional protein; KEGG: mca:MCA2492 folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase, middle domain protein.
Rmag_1000 protein networkhttps://string-db.org/network/413404.Rmag_1000Hypothetical protein; KEGG: hch:HCH_02441 uncharacterized membrane protein, required for colicin V production.
purF protein networkhttps://string-db.org/network/413404.Rmag_1001Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine p [...]
metZ protein networkhttps://string-db.org/network/413404.Rmag_1002O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
Rmag_1003 protein networkhttps://string-db.org/network/413404.Rmag_10033-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-deceno [...]
Rmag_1004 protein networkhttps://string-db.org/network/413404.Rmag_10043-oxoacyl-[acyl-carrier-protein] synthase I; PFAM: beta-ketoacyl synthase; KEGG: tcx:Tcr_1945 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
secF protein networkhttps://string-db.org/network/413404.Rmag_1005Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protei [...]
secD protein networkhttps://string-db.org/network/413404.Rmag_1006Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
yajC protein networkhttps://string-db.org/network/413404.Rmag_1007Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membran [...]
serS protein networkhttps://string-db.org/network/413404.Rmag_1008seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...]
Rmag_1009 protein networkhttps://string-db.org/network/413404.Rmag_1009PFAM: Rhodanese domain protein; KEGG: vch:VCA0100 phage shock protein E.
Rmag_1010 protein networkhttps://string-db.org/network/413404.Rmag_1010KEGG: tbd:Tbd_2490 hypothetical protein.
Rmag_1011 protein networkhttps://string-db.org/network/413404.Rmag_1011PFAM: Rhodanese domain protein; KEGG: plt:Plut_0032 rhodanese-like.
Rmag_1012 protein networkhttps://string-db.org/network/413404.Rmag_1012Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: hch:HCH_04021 response regulator containing a CheY-like receiver domain an [...]
Rmag_1013 protein networkhttps://string-db.org/network/413404.Rmag_1013Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosph [...]
mnmE protein networkhttps://string-db.org/network/413404.Rmag_1014tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
gshA protein networkhttps://string-db.org/network/413404.Rmag_1015TIGRFAM: glutamate--cysteine ligase; KEGG: hch:HCH_06422 glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
Rmag_1016 protein networkhttps://string-db.org/network/413404.Rmag_1016TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; thiamine monophosphate synthase; KEGG: noc:Noc_0306 mutator MutT.
Rmag_1018 protein networkhttps://string-db.org/network/413404.Rmag_1018PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rba:RB5654 glutamate synthase [NAD [...]
Rmag_1019 protein networkhttps://string-db.org/network/413404.Rmag_1019Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
Rmag_1020 protein networkhttps://string-db.org/network/413404.Rmag_1020Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
mfd protein networkhttps://string-db.org/network/413404.Rmag_1021Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...]
Rmag_1022 protein networkhttps://string-db.org/network/413404.Rmag_1022PFAM: PfkB domain protein; KEGG: noc:Noc_2548 carbohydrate kinase, PfkB.
ispH protein networkhttps://string-db.org/network/413404.Rmag_10234-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...]
accD protein networkhttps://string-db.org/network/413404.Rmag_1024acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrie [...]
trpA protein networkhttps://string-db.org/network/413404.Rmag_1025Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
hemE protein networkhttps://string-db.org/network/413404.Rmag_1026Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
rpmE protein networkhttps://string-db.org/network/413404.Rmag_1027LSU ribosomal protein L31P; Binds the 23S rRNA.
Rmag_1028 protein networkhttps://string-db.org/network/413404.Rmag_1028Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: [...]
Rmag_1029 protein networkhttps://string-db.org/network/413404.Rmag_1029Hypothetical protein.
glmU protein networkhttps://string-db.org/network/413404.Rmag_1030UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyz [...]
trpB protein networkhttps://string-db.org/network/413404.Rmag_1031Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
trpF protein networkhttps://string-db.org/network/413404.Rmag_1032PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: pfo:Pfl_1897 N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
Rmag_1033 protein networkhttps://string-db.org/network/413404.Rmag_1033Hypothetical protein.
topA protein networkhttps://string-db.org/network/413404.Rmag_1034DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
smg protein networkhttps://string-db.org/network/413404.Rmag_1035PFAM: protein of unknown function DUF494; KEGG: noc:Noc_3011 protein of unknown function DUF494; Belongs to the Smg family.
rpmH protein networkhttps://string-db.org/network/413404.Rmag_1037PFAM: ribosomal protein L34; KEGG: vvy:VV0005 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
Rmag_1038 protein networkhttps://string-db.org/network/413404.Rmag_1038Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
Rmag_1039 protein networkhttps://string-db.org/network/413404.Rmag_1039Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
yidC protein networkhttps://string-db.org/network/413404.Rmag_1040Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane pr [...]
Rmag_1041 protein networkhttps://string-db.org/network/413404.Rmag_1041KEGG: tbd:Tbd_2491 hypothetical protein.
Rmag_1042 protein networkhttps://string-db.org/network/413404.Rmag_1042N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: aci:ACIAD0063 N-acetyl-anhydromuramyl-L-alanine amidase (regulates a [...]
Rmag_1043 protein networkhttps://string-db.org/network/413404.Rmag_10433-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorga [...]
atpC protein networkhttps://string-db.org/network/413404.Rmag_1044ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
atpD protein networkhttps://string-db.org/network/413404.Rmag_1045ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to [...]
atpG protein networkhttps://string-db.org/network/413404.Rmag_1046ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity [...]
atpA protein networkhttps://string-db.org/network/413404.Rmag_1047ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta [...]
atpH protein networkhttps://string-db.org/network/413404.Rmag_1048ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) contai [...]
atpF protein networkhttps://string-db.org/network/413404.Rmag_1049ATP synthase F0, B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...]
atpE protein networkhttps://string-db.org/network/413404.Rmag_1050ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...]
atpB protein networkhttps://string-db.org/network/413404.Rmag_1051ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
Rmag_1052 protein networkhttps://string-db.org/network/413404.Rmag_1052KEGG: tcx:Tcr_2172 ATP synthase protein I.
Rmag_1053 protein networkhttps://string-db.org/network/413404.Rmag_1053Sulfide-quinone oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tcx:Tcr_1170 sulfide-quinone reductase.
nadK protein networkhttps://string-db.org/network/413404.Rmag_1054NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl [...]
grpE protein networkhttps://string-db.org/network/413404.Rmag_1055GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleot [...]
Rmag_1056 protein networkhttps://string-db.org/network/413404.Rmag_1056Hypothetical protein.
dsbD protein networkhttps://string-db.org/network/413404.Rmag_1057Protein-disulfide reductase; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by trans [...]
aroQ protein networkhttps://string-db.org/network/413404.Rmag_10583-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
Rmag_1059 protein networkhttps://string-db.org/network/413404.Rmag_1059acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the car [...]
Rmag_1060 protein networkhttps://string-db.org/network/413404.Rmag_1060acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the ca [...]
argC protein networkhttps://string-db.org/network/413404.Rmag_1061N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydroge [...]
erpA protein networkhttps://string-db.org/network/413404.Rmag_1062Iron-sulfur cluster assembly accessory protein; Required for insertion of 4Fe-4S clusters for at least IspG.
Rmag_1063 protein networkhttps://string-db.org/network/413404.Rmag_1063PFAM: Citrate synthase; KEGG: tcx:Tcr_0350 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
ubiE protein networkhttps://string-db.org/network/413404.Rmag_1064Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methox [...]
Rmag_1065 protein networkhttps://string-db.org/network/413404.Rmag_1065Hypothetical protein.
Rmag_1066 protein networkhttps://string-db.org/network/413404.Rmag_10662-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfa [...]
rplY protein networkhttps://string-db.org/network/413404.Rmag_1067LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 f [...]
pth protein networkhttps://string-db.org/network/413404.Rmag_1068peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
ychF protein networkhttps://string-db.org/network/413404.Rmag_1069GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
gpmI protein networkhttps://string-db.org/network/413404.Rmag_1070Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
Rmag_1071 protein networkhttps://string-db.org/network/413404.Rmag_1071PFAM: ribulose-phosphate 3-epimerase; KEGG: son:SO0292 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
rpsB protein networkhttps://string-db.org/network/413404.Rmag_1072PFAM: ribosomal protein S2; KEGG: pae:PA3656 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
tsf protein networkhttps://string-db.org/network/413404.Rmag_1073Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hyd [...]
Rmag_1075 protein networkhttps://string-db.org/network/413404.Rmag_1075Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
tpiA protein networkhttps://string-db.org/network/413404.Rmag_1076Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...]