| purE protein network | https://string-db.org/network/320483.AMF_001 | Phosphoribosylaminoimidazole carboxylase catalytic subunit (purE); Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR [...] |
| AMF_002 protein network | https://string-db.org/network/320483.AMF_002 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.582(Affirmative). |
| rodA protein network | https://string-db.org/network/320483.AMF_005 | Rod shape determining protein (rodA); Psort: bacterial inner membrane --- Certainty= 0.429(Affirmative); COG0772 FtsW bacterial cell division membrane protein; Belongs to the SEDS family. |
| ihfA protein network | https://string-db.org/network/320483.AMF_006 | Presumptive integration host factor alpha-subunit (ihfA); This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombinatio [...] |
| AMF_007 protein network | https://string-db.org/network/320483.AMF_007 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.277(Affirmative); COG0789 SoxR Predicted transcriptional regulators. |
| AMF_008 protein network | https://string-db.org/network/320483.AMF_008 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.158(Affirmative). |
| AMF_009 protein network | https://string-db.org/network/320483.AMF_009 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.297(Affirmative). |
| murC protein network | https://string-db.org/network/320483.AMF_010 | UDP-N-acetylmuramate-alanine ligase (murC); Cell wall formation; Belongs to the MurCDEF family. |
| trpS protein network | https://string-db.org/network/320483.AMF_011 | tryptophanyl-tRNA synthetase (trpS); Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. |
| grpE protein network | https://string-db.org/network/320483.AMF_012 | GrpE protein (grpE); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the [...] |
| ribD protein network | https://string-db.org/network/320483.AMF_013 | Riboflavin biosynthesis protein (ribD); Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-ter [...] |
| pyrG protein network | https://string-db.org/network/320483.AMF_015 | CTP synthase (pyrG); Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with [...] |
| secG protein network | https://string-db.org/network/320483.AMF_016 | Preprotein translocase SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. |
| AMF_017 protein network | https://string-db.org/network/320483.AMF_017 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.270(Affirmative). |
| xerD protein network | https://string-db.org/network/320483.AMF_018 | Tyrosine recombinase (xerD); Psort: bacterial inner membrane --- Certainty= 0.285(Affirmative); COG0582 XerC integrase; Belongs to the 'phage' integrase family. |
| phnL protein network | https://string-db.org/network/320483.AMF_019 | ATP transporter ATP-binding protein (phnL); Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the [...] |
| maeB protein network | https://string-db.org/network/320483.AMF_020 | Malate dehydrogenase and phosphate acetyltransferase (maeB); Psort: bacterial inner membrane --- Certainty= 0.140(Affirmative); COG0039 Mdh malate/lactate dehydrogenases. |
| AMF_021 protein network | https://string-db.org/network/320483.AMF_021 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.234(Affirmative); signalP: Prediction: Signal peptide Signal peptide prob [...] |
| nuoN protein network | https://string-db.org/network/320483.AMF_022 | NADH dehydrogenase I chain N (nuoN); Psort: bacterial inner membrane --- Certainty= 0.395(Affirmative); COG1007 NuoN NADH:ubiquinone oxidoreductase subunit 2 (chain N). |
| AMF_023 protein network | https://string-db.org/network/320483.AMF_023 | ORF X; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative) signalP: Prediction: Signal peptide Signal peptide probability: 0.998 Max cleavage site probab [...] |
| AMF_024 protein network | https://string-db.org/network/320483.AMF_024 | ORF Y; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.676(Affirmative) psort: bacterial periplasmic space --- Certainty= 0.193(Affirmative). |
| AMF_026 protein network | https://string-db.org/network/320483.AMF_026 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.127(Affirmative). |
| thiS protein network | https://string-db.org/network/320483.AMF_027 | Thiamine biosynthesis protein (ThiS); Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.230(Affirmative); COG2104 ThiS Sulfur transfer protein involv [...] |
| thiG protein network | https://string-db.org/network/320483.AMF_028 | Thiazole biosynthesis protein (thiG); Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarbo [...] |
| AMF_029 protein network | https://string-db.org/network/320483.AMF_029 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.321(Affirmative). |
| gltX protein network | https://string-db.org/network/320483.AMF_030 | Glutamate tRNA ligase (gltX); Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor [...] |
| AMF_031 protein network | https://string-db.org/network/320483.AMF_031 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.928(Affirmative). |
| AMF_032 protein network | https://string-db.org/network/320483.AMF_032 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.125(Affirmative); COG0742 N6-adenine-specific methylase. |
| proP1 protein network | https://string-db.org/network/320483.AMF_035 | Proline/betaine transport protein (proP1); Psort: bacterial inner membrane --- Certainty= 0.440(Affirmative); COG0477 ProP permeases of the major facilitator superfamily. |
| rpsP protein network | https://string-db.org/network/320483.AMF_037 | 30S ribosomal protein S16 (rpsP); Psort: bacterial cytoplasm --- Certainty= 0.288(Affirmative); COG0228 RpsP ribosomal protein S16. |
| glmU protein network | https://string-db.org/network/320483.AMF_038 | UDP-N-acetylglucosamine pyrophosphorylase (glmU); Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain [...] |
| ptr1 protein network | https://string-db.org/network/320483.AMF_041 | Putative pteridine reductase 1; Psort: bacterial cytoplasm --- Certainty= 0.076(Affirmative); COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenas [...] |
| pheS protein network | https://string-db.org/network/320483.AMF_042 | Phenylalanyl tRNA synthetase alpha subunit (pheS); Psort: bacterial cytoplasm --- Certainty= 0.102(Affirmative); COG0016 PheS phenylalanyl-tRNA synthetase alpha subunit. |
| rplT protein network | https://string-db.org/network/320483.AMF_043 | Cyanelle 50S ribosomal protein L20 (rplT); Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein s [...] |
| AMF_044 protein network | https://string-db.org/network/320483.AMF_044 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.087(Affirmative). |
| rho protein network | https://string-db.org/network/320483.AMF_045 | Transcription termination factor rho (rho); Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, [...] |
| AMF_048 protein network | https://string-db.org/network/320483.AMF_048 | ORF Y; Member of the msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.676(Affirmative). |
| AMF_049 protein network | https://string-db.org/network/320483.AMF_049 | ORF X; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative); signalP: Prediction: Signal peptide Signal peptide probability: 1.000 Max cleavage site proba [...] |
| fpbA protein network | https://string-db.org/network/320483.AMF_050 | Iron binding protein FbpA precursor (fpbA); Psort: bacterial inner membrane --- Certainty= 0.459(Affirmative). |
| AMF_051 protein network | https://string-db.org/network/320483.AMF_051 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.530(Affirmative) bacterial periplasmic space --- Certainty= 0.164(Affirma [...] |
| AMF_052 protein network | https://string-db.org/network/320483.AMF_052 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.033(Affirmative). |
| nrdR protein network | https://string-db.org/network/320483.AMF_053 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. |
| AMF_054 protein network | https://string-db.org/network/320483.AMF_054 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.013(Affirmative). |
| AMF_055 protein network | https://string-db.org/network/320483.AMF_055 | Called by Glimmer 2; Conserved family protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.581(Affirmative); COG1463 Permease component of an ABC-transporter. |
| omp14 protein network | https://string-db.org/network/320483.AMF_056 | Outer membrane protein 14; Member of the msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.153(Affirmative). |
| recA protein network | https://string-db.org/network/320483.AMF_061 | recA protein (recA); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization [...] |
| pyrE protein network | https://string-db.org/network/320483.AMF_062 | Orotate phosphoribosyltransferase (pyrE); Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate ( [...] |
| thiF protein network | https://string-db.org/network/320483.AMF_063 | Thiamine biosynthesis protein (thiF); Psort: bacterial outside --- Certainty= 0.300(Affirmative); COG0476 ThiF dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis f [...] |
| msp4 protein network | https://string-db.org/network/320483.AMF_064 | Major surface protein 4 (msp4); Member of msp2 superfamily; psort: bacterial cytoplasm --- Certainty= 0.211(Affirmative) signalP: Prediction: Signal peptide Signal peptide probability: 1.000 Max [...] |
| AMF_066 protein network | https://string-db.org/network/320483.AMF_066 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.126(Affirmative); COG0679 Predicted permeases. |
| AMF_067 protein network | https://string-db.org/network/320483.AMF_067 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.386(Affirmative). |
| xseB protein network | https://string-db.org/network/320483.AMF_068 | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...] |
| trxA protein network | https://string-db.org/network/320483.AMF_069 | Thioredoxin (trxA); Posrt: bacterial cytoplasm --- Certainty= 0.097(Affirmative); COG0526 TrxA thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family. |
| trbG protein network | https://string-db.org/network/320483.AMF_070 | Conjugal transfer protein trbG precursor (trbG); Psort: bacterial outer membrane --- Certainty= 0.941(Affirmative); COG3504 VirB9 Type IV secretory pathway, VirB9 components. |
| pdhA protein network | https://string-db.org/network/320483.AMF_071 | Pyruvate dehydrogenase E1 component, alpha subunit precursor (pdhA); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). |
| AMF_072 protein network | https://string-db.org/network/320483.AMF_072 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.121(Affirmative); COG0596 Predicted hydrolases or acyltransferases (alpha [...] |
| guaB protein network | https://string-db.org/network/320483.AMF_073 | Inosine monophosphate dehydrogenase (guaB); Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synt [...] |
| nadK protein network | https://string-db.org/network/320483.AMF_074 | Conserved family ATP-NAD kinase called by Glimmer 2; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifical [...] |
| rpmE protein network | https://string-db.org/network/320483.AMF_076 | 50S ribosomal protein L31 (LSU/L31) (rpmE); Psort: bacterial cytoplasm --- Certainty= 0.229(Affirmative); COG0254 RpmE ribosomal protein L31. |
| fabD protein network | https://string-db.org/network/320483.AMF_077 | Malonyl CoA-acyl carrier protein transacylase (fabD); Psort: bacterial cytoplasm --- Certainty= 0.118(Affirmative); COG0331 FabD (acyl-carrier-protein) S-malonyltransferase. |
| tmk protein network | https://string-db.org/network/320483.AMF_078 | Thymidylate kinase (tmk); Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. |
| AMF_079 protein network | https://string-db.org/network/320483.AMF_079 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.554(Affirmative); COG0477 Permeases of the major facilitator superfamily. |
| AMF_080 protein network | https://string-db.org/network/320483.AMF_080 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.300(Affirmative). |
| secB protein network | https://string-db.org/network/320483.AMF_081 | Protein export chaperone (secB); One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor prote [...] |
| AMF_083 protein network | https://string-db.org/network/320483.AMF_083 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.922(Affirmative); COG1651 Protein-disulfide isomerase. |
| mpp protein network | https://string-db.org/network/320483.AMF_084 | Mpp; Mitochondrial processing protease; psort: bacterial cytoplasm --- Certainty= 0.244(Affirmative); COG0612 PqqL predicted Zn-dependent peptidases; Belongs to the peptidase M16 family. |
| AMF_085 protein network | https://string-db.org/network/320483.AMF_085 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.210(Affirmative); COG0739 Membrane proteins related to metalloendopeptida [...] |
| AMF_086 protein network | https://string-db.org/network/320483.AMF_086 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.095(Affirmative); COG2070 Dioxygenases related to 2-nitropropane dioxygenase. |
| ribE protein network | https://string-db.org/network/320483.AMF_087 | Riboflavin synthase alpha chain (ribE); Psort: bacterial outer membrane --- Certainty= 0.864(Affirmative); COG0307 RibC riboflavin synthase alpha chain. |
| msp1B-2 protein network | https://string-db.org/network/320483.AMF_089 | Major surface protein 1B-2; Member of msp1b gene family, full length gene copy 2; member of msp1 superfamily; psort: bacterial inner membrane --- Certainty= 0.285(Affirmative). |
| AMF_090 protein network | https://string-db.org/network/320483.AMF_090 | Major surface protein 1B; Member of msp1b gene family, partial gene 2; member of msp1 superfamily; psort: bacterial inner membrane --- Certainty= 0.227(Affirmative). |
| mfd protein network | https://string-db.org/network/320483.AMF_091 | Transcription repair coupling factor (mfd); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its trunca [...] |
| rnhA protein network | https://string-db.org/network/320483.AMF_092 | Ribonuclease H (rnhA); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. |
| AMF_093 protein network | https://string-db.org/network/320483.AMF_093 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.317(Affirmative). |
| pyrH protein network | https://string-db.org/network/320483.AMF_094 | Uridylate kinase (pyrH); Catalyzes the reversible phosphorylation of UMP to UDP. |
| rrf protein network | https://string-db.org/network/320483.AMF_095 | Ribosome recycling factor (rrf); Psort: bacterial cytoplasm --- Certainty= 0.230(Affirmative); COG0233 Frr Ribosome recycling factor. |
| uppS protein network | https://string-db.org/network/320483.AMF_096 | Undecaprenyl diphosphate synthase (uppS); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. |
| cdsA protein network | https://string-db.org/network/320483.AMF_097 | Phosphatidate cytidylyltransferase (cdsA); COG0575 CdsA CDP-diglyceride synthetase. |
| AMF_098 protein network | https://string-db.org/network/320483.AMF_098 | Major surface protein 1B; Member of msp1b gene family, partial gene 3; member of msp1 superfamily; psort: bacterial inner membrane --- Certainty= 0.227(Affirmative). |
| AMF_099 protein network | https://string-db.org/network/320483.AMF_099 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.136(Affirmative). |
| purC protein network | https://string-db.org/network/320483.AMF_100 | Phosphoribosoylaminoimidazole-succinocarboxamide synthase (purC); Psort: bacterial cytoplasm --- Certainty= 0.378(Affirmative); COG0152 PurC phosphoribosylaminoimidazole-succinocarboxamide (SAICA [...] |
| dapF protein network | https://string-db.org/network/320483.AMF_1002 | Diaminopimelate epimerase (dapF); Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential compone [...] |
| AMF_1003 protein network | https://string-db.org/network/320483.AMF_1003 | Hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.932(Affirmative). |
| AMF_1004 protein network | https://string-db.org/network/320483.AMF_1004 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.391(Affirmative). |
| pgk protein network | https://string-db.org/network/320483.AMF_1005 | Phosphoglycerate kinase (pgk); Psort: bacterial inner membrane --- Certainty= 0.111(Affirmative); COG0126 Pgk 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. |
| xseA protein network | https://string-db.org/network/320483.AMF_1006 | Exodeoxyribonuclease large subunit (xseA); Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligon [...] |
| AMF_1007 protein network | https://string-db.org/network/320483.AMF_1007 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.346(Affirmative). |
| dapD protein network | https://string-db.org/network/320483.AMF_1009 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase (dapD); Psort: bacterial inner membrane --- Certainty= 0.106(Affirmative); COG2171 DapD tetrahydrodipicolinate N-succinyltransferase [...] |
| hisS protein network | https://string-db.org/network/320483.AMF_101 | Histidyl tRNA synthetase (hisS); Psort: bacterial cytoplasm --- Certainty= 0.492(Affirmative); COG0124 hisS histidyl-tRNA synthetase. |
| thdF protein network | https://string-db.org/network/320483.AMF_1010 | Thiophene and furan oxidation protein (thdF); Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U3 [...] |
| dfp protein network | https://string-db.org/network/320483.AMF_1011 | Pantothenate metabolism flavoprotein (dfp); Psort: bacterial periplasmic space --- Certainty= 0.916(Affirmative); COG0452 Dfp phosphopantothenoylcysteine synthetase/decarboxylase. |
| recG protein network | https://string-db.org/network/320483.AMF_1012 | ATP-dependent DNA helicase (recG); Psort: bacterial inner membrane --- Certainty= 0.111(Affirmative); COG1200 RecG RecG-like helicases. |
| AMF_1013 protein network | https://string-db.org/network/320483.AMF_1013 | NADH-ubiquinone oxidoreductase, putative; Psort: bacterial inner membrane --- Certainty= 0.102(Affirmative); COG0702 Predicted nucleoside-diphosphate-sugar epimerases. |
| purF protein network | https://string-db.org/network/320483.AMF_1014 | Amidophosphoribosyltransferase (purF); Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. |
| pth protein network | https://string-db.org/network/320483.AMF_1015 | peptidyl-tRNA hydrolase (pth); The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. |
| rplY protein network | https://string-db.org/network/320483.AMF_1016 | 50S ribosomal protein L25 (rplY); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein [...] |
| dsbA protein network | https://string-db.org/network/320483.AMF_102 | Disulfide oxidoreductase; Psort: bacterial inner membrane --- Certainty= 0.533(Affirmative); signalP: Prediction: Signal peptide Signal peptide probability: 0.922 Max cleavage site probability: 0 [...] |
| comF protein network | https://string-db.org/network/320483.AMF_1020 | Competence protein F (comF); Psort: bacterial inner membrane --- Certainty= 0.185(Affirmative); COG1040 ComFC Predicted amidophosphoribosyltransferases. |
| dapE protein network | https://string-db.org/network/320483.AMF_1021 | Succinyl-diaminopimelate desuccinylase (dapE); Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate invo [...] |
| kefB protein network | https://string-db.org/network/320483.AMF_1022 | Glutathione-regulated potassium-efflux system protein KEFB (kefB); Psort: bacterial inner membrane --- Certainty= 0.637(Affirmative); COG0475 KefB Kef-type K+ transport systems, membrane componen [...] |
| AMF_1023 protein network | https://string-db.org/network/320483.AMF_1023 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.340(Affirmative); COG0526 Thiol-disulfide isomerase and thioredoxins. |
| AMF_1024 protein network | https://string-db.org/network/320483.AMF_1024 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.401(Affirmative); COG1981 Predicted membrane protein. |
| pdhB protein network | https://string-db.org/network/320483.AMF_1025 | Pyruvate dehydrogenase E1 beta subunit precursor (pdhB); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. |
| AMF_1026 protein network | https://string-db.org/network/320483.AMF_1026 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.285(Affirmative). |
| tldD protein network | https://string-db.org/network/320483.AMF_1027 | tldD protein; Psort: bacterial cytoplasm --- Certainty= 0.333(Affirmative); COG0312 TldD predicted Zn-dependent proteases and their inactivated homologs. |
| ychF protein network | https://string-db.org/network/320483.AMF_1028 | GTP-binding protein YchF, putative; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. |
| ispF protein network | https://string-db.org/network/320483.AMF_1029 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthetase (IspF); Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of is [...] |
| coxW protein network | https://string-db.org/network/320483.AMF_103 | Cytochrome C oxidase assembly protein (coxW); Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. |
| ispD protein network | https://string-db.org/network/320483.AMF_1030 | 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase (ispD); Psort: bacterial periplasmic space --- Certainty= 0.786(Affirmative); COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [...] |
| AMF_1031 protein network | https://string-db.org/network/320483.AMF_1031 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.501(Affirmative). |
| AMF_1032 protein network | https://string-db.org/network/320483.AMF_1032 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.482(Affirmative). |
| rpmI protein network | https://string-db.org/network/320483.AMF_1033 | Ribosomal protein L35 (rpmI); Psort: bacterial cytoplasm --- Certainty= 0.243(Affirmative); COG0291 RpmI ribosomal protein L35. |
| AMF_1034 protein network | https://string-db.org/network/320483.AMF_1034 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.072(Affirmative); COG2835 Uncharacterized BCR; Belongs to the UPF0434 family. |
| AMF_1035 protein network | https://string-db.org/network/320483.AMF_1035 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.306(Affirmative); COG1238 Uncharacterized membrane protein. |
| rpmG protein network | https://string-db.org/network/320483.AMF_1036 | 50S ribosomal protein L33 (rpmG); Psort: bacterial cytoplasm --- Certainty= 0.132(Affirmative); COG0267 RpmG ribosomal protein L33. |
| AMF_1037 protein network | https://string-db.org/network/320483.AMF_1037 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.279(Affirmative). |
| AMF_1038 protein network | https://string-db.org/network/320483.AMF_1038 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.126(Affirmative). |
| AMF_1039 protein network | https://string-db.org/network/320483.AMF_1039 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.044(Affirmative). |
| panB protein network | https://string-db.org/network/320483.AMF_104 | 3-methyl-2-oxobutanoate hydroxymethyltransferase (panB); Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovaler [...] |
| hupB protein network | https://string-db.org/network/320483.AMF_1041 | Histone-like bacterial DNA-binding protein; Psort: bacterial cytoplasm --- Certainty= 0.133(Affirmative); COG0776 HimA Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-lik [...] |
| AMF_1042 protein network | https://string-db.org/network/320483.AMF_1042 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.327(Affirmative). |
| AMF_1043 protein network | https://string-db.org/network/320483.AMF_1043 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.053(Affirmative). |
| AMF_1044 protein network | https://string-db.org/network/320483.AMF_1044 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.072(Affirmative). |
| AMF_1045 protein network | https://string-db.org/network/320483.AMF_1045 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.327(Affirmative). |
| AMF_1046 protein network | https://string-db.org/network/320483.AMF_1046 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.176(Affirmative). |
| rpmF protein network | https://string-db.org/network/320483.AMF_1047 | Large subunit ribosomal protein L32 (rpmF); Psort: bacterial cytoplasm --- Certainty= 0.081(Affirmative); COG0333 RpmF ribosomal protein L32. |
| rpmH protein network | https://string-db.org/network/320483.AMF_1048 | Large ribosome subunit L34 (rpmH); Psort: bacterial cytoplasm --- Certainty= 0.474(Affirmative); COG0230 RpmH ribosomal protein L34. |
| omp15 protein network | https://string-db.org/network/320483.AMF_1049 | Outer membrane protein 15; Member of the msp2 superfamily; Truncated compared to St. Maries; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative). |
| ccmA protein network | https://string-db.org/network/320483.AMF_105 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact [...] |
| AMF_1050 protein network | https://string-db.org/network/320483.AMF_1050 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.266(Affirmative). |
| AMF_1051 protein network | https://string-db.org/network/320483.AMF_1051 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.235(Affirmative). |
| AMF_1052 protein network | https://string-db.org/network/320483.AMF_1052 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.210(Affirmative). |
| AMF_1054 protein network | https://string-db.org/network/320483.AMF_1054 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.023(Affirmative). |
| AMF_1056 protein network | https://string-db.org/network/320483.AMF_1056 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.307(Affirmative). |
| pepA protein network | https://string-db.org/network/320483.AMF_1057 | Leucyl aminopeptidase (pepA); Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various pep [...] |
| murA protein network | https://string-db.org/network/320483.AMF_106 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA); Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. |
| dcd protein network | https://string-db.org/network/320483.AMF_107 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. |
| AMF_108 protein network | https://string-db.org/network/320483.AMF_108 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). |
| cspA protein network | https://string-db.org/network/320483.AMF_109 | Cold shock protein (cspA); Psort: bacterial cytoplasm --- Certainty= 0.427(Affirmative); COG1278 CspC cold shock proteins. |
| ntrY protein network | https://string-db.org/network/320483.AMF_110 | Nitrogen regulation protein (ntrY); Psort: bacterial inner membrane --- Certainty= 0.567(Affirmative); signalP: Prediction: Signal peptide Signal peptide probability: 0.998 Max cleavage site prob [...] |
| rnd protein network | https://string-db.org/network/320483.AMF_111 | Ribonuclease D (rnd); Psort: bacterial inner membrane --- Certainty= 0.035(Affirmative); COG0349 Rnd ribonuclease D. |
| ligA protein network | https://string-db.org/network/320483.AMF_112 | DNA ligase (ligA); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energ [...] |
| grxC2 protein network | https://string-db.org/network/320483.AMF_113 | Glutaredoxin-like protein GRLA (grxC2); Psort: bacterial cytoplasm --- Certainty= 0.297(Affirmative); Belongs to the glutaredoxin family. Monothiol subfamily. |
| AMF_114 protein network | https://string-db.org/network/320483.AMF_114 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.164(Affirmative); COG0271 BolA Stress-induced morphogen (activity unknown); Be [...] |
| dsbE protein network | https://string-db.org/network/320483.AMF_115 | Thiol:disulfide interchange protein (dsbE); Psort: bacterial inner membrane --- Certainty= 0.414(Affirmative); COG0526 TrxA Thiol-disulfide isomerase and thioredoxins. |
| radA protein network | https://string-db.org/network/320483.AMF_116 | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated stran [...] |
| AMF_117 protein network | https://string-db.org/network/320483.AMF_117 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.576(Affirmative); COG1593 Integral membrane protein, possible transporter [...] |
| AMF_118 protein network | https://string-db.org/network/320483.AMF_118 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.465(Affirmative). |
| rpsF protein network | https://string-db.org/network/320483.AMF_119 | 30S ribosomal protein S6 (rpsF); Binds together with S18 to 16S ribosomal RNA. |
| rpsR protein network | https://string-db.org/network/320483.AMF_120 | Small subunit ribosomal protein S18 (rpsR); Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the [...] |
| rplI protein network | https://string-db.org/network/320483.AMF_121 | Ribosomal protein L9 (rplI); Binds to the 23S rRNA. |
| glyA protein network | https://string-db.org/network/320483.AMF_122 | Glycine/serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves [...] |
| cyaY protein network | https://string-db.org/network/320483.AMF_123 | Putative CyaY protein; Psort: bacterial cytoplasm --- Certainty= 0.285(Affirmative); COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain); Belongs to the frataxin family. |
| msbA2 protein network | https://string-db.org/network/320483.AMF_124 | ABC efflux transporter (msbA2); Psort: bacterial inner membrane --- Certainty= 0.397(Affirmative); COG1132 MdlB ABC-type multidrug/protein/lipid transport system, ATPase component. |
| sdhA protein network | https://string-db.org/network/320483.AMF_125 | Succinate dehydrogenase flavoprotein subunit (sdhA/frdA); Psort: bacterial inner membrane --- Certainty= 0.202(Affirmative); COG1053 SdhA succinate dehydrogenase/fumarate reductase, flavoprotein [...] |
| sdhB protein network | https://string-db.org/network/320483.AMF_126 | Succinate dehydrogenase iron-sulfur protein (sdhB/frdB); Psort: bacterial cytoplasm --- Certainty= 0.392(Affirmative); COG0479 FrdB succinate dehydrogenase/fumarate reductase Fe-S protein. |
| thy1 protein network | https://string-db.org/network/320483.AMF_127 | THY1 protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as [...] |
| bcr2 protein network | https://string-db.org/network/320483.AMF_128 | Bicyclomycin resistance protein (bcr2); Psort: bacterial inner membrane --- Certainty= 0.459(Affirmative). |
| ruvB protein network | https://string-db.org/network/320483.AMF_129 | Holliday junction DNA helicase (ruvB); The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote stra [...] |
| ruvA protein network | https://string-db.org/network/320483.AMF_130 | Holliday junction DNA helicase (ruvA); The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote stra [...] |
| ccmC protein network | https://string-db.org/network/320483.AMF_131 | Cytochrome c-type biogenesis protein (ccmC); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. |
| gmk protein network | https://string-db.org/network/320483.AMF_132 | Guanylate kinase (gmk); Essential for recycling GMP and indirectly, cGMP. |
| AMF_133 protein network | https://string-db.org/network/320483.AMF_133 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.319(Affirmative); COG0726 Predicted xylanase/chitin deacetylase. |
| folD protein network | https://string-db.org/network/320483.AMF_134 | Methylenetetrahydrofolate dehydrogenase (folD); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolat [...] |
| msp1B-1 protein network | https://string-db.org/network/320483.AMF_135 | Major surface protein 1B-1; Member of msp1 superfamily; psort: bacterial inner membrane --- Certainty= 0.227(Affirmative). |
| AMF_139 protein network | https://string-db.org/network/320483.AMF_139 | Major surface protein 1B; Member of msp1 superfamily; msp1B partial gene 1; psort: bacterial inner membrane --- Certainty= 0.266(Affirmative). |
| AMF_141 protein network | https://string-db.org/network/320483.AMF_141 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.151(Affirmative); COG0596 Predicted hydrolases or acyltransferases (alpha [...] |
| cycM protein network | https://string-db.org/network/320483.AMF_142 | Cytochrome C (cycM); Psort: bacterial inner membrane --- Certainty= 0.412(Affirmative); COG3303 NrfA formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit. |
| nuoL2 protein network | https://string-db.org/network/320483.AMF_144 | NADH dehydrogenase I chain L (nuoL2); Psort: bacterial inner membrane --- Certainty= 0.463(Affirmative); COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antipo [...] |
| ppdK protein network | https://string-db.org/network/320483.AMF_145 | Pyruvate, phosphate dikinase precursor (ppdK); Psort: bacterial cytoplasm --- Certainty= 0.272(Affirmative); COG0574 PpsA phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the [...] |
| AMF_146 protein network | https://string-db.org/network/320483.AMF_146 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.389(Affirmative). |
| AMF_147 protein network | https://string-db.org/network/320483.AMF_147 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.075(Affirmative); COG0546 Predicted phosphatases. |
| aspS protein network | https://string-db.org/network/320483.AMF_148 | aspartyl-tRNA synthetase (aspS); Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two [...] |
| AMF_149 protein network | https://string-db.org/network/320483.AMF_149 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.808(Affirmative) bacterial outer membrane --- Certainty= 0.790(Affirmativ [...] |
| gshB protein network | https://string-db.org/network/320483.AMF_150 | Glutathione synthase (gshB); Psort: bacterial inner membrane --- Certainty= 0.185(Affirmative); COG0189 RimK glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase) [...] |
| ddlB protein network | https://string-db.org/network/320483.AMF_151 | D-alanine--D-alanine ligase (ddlB); Cell wall formation. |
| ftsQ protein network | https://string-db.org/network/320483.AMF_152 | Cell division protein (ftsQ); Psort: bacterial cytoplasm --- Certainty= 0.174(Affirmative); COG1589 FtsQ cell division septal protein. |
| ntrX protein network | https://string-db.org/network/320483.AMF_153 | Nitrogen assimilation regulatory protein (ntrX); Psort: bacterial cytoplasm --- Certainty= 0.262(Affirmative); COG3852 NtrB signal transduction histidine kinase, nitrogen specific. |
| pdhD protein network | https://string-db.org/network/320483.AMF_156 | Dihydrolipoamide dehydrogenase (pdhD); Psort: bacterial inner membrane --- Certainty= 0.117(Affirmative). |
| AMF_157 protein network | https://string-db.org/network/320483.AMF_157 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.643(Affirmative). |
| AMF_158 protein network | https://string-db.org/network/320483.AMF_158 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.355(Affirmative). |
| AMF_159 protein network | https://string-db.org/network/320483.AMF_159 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.646(Affirmative). |
| AMF_160 protein network | https://string-db.org/network/320483.AMF_160 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.701(Affirmative) bacterial outer membrane --- Certainty= 0.317(Affirma [...] |
| phnP protein network | https://string-db.org/network/320483.AMF_161 | PhnP protein; Psort: bacterial cytoplasm --- Certainty= 0.098(Affirmative); COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I. |
| glnA protein network | https://string-db.org/network/320483.AMF_162 | Glutamine synthetase (glnA); Psort: bacterial cytoplasm --- Certainty= 0.125(Affirmative); COG0174 GlnA glutamine synthase; Belongs to the glutamine synthetase family. |
| pstC protein network | https://string-db.org/network/320483.AMF_163 | ABC-type phosphate transport system, permease component (pstC); Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate a [...] |
| alaS protein network | https://string-db.org/network/320483.AMF_164 | alanyl-tRNA synthetase (alaS); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end [...] |
| sucD protein network | https://string-db.org/network/320483.AMF_167 | succinyl-CoA ligase chain A (sucD); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus repres [...] |
| sucC protein network | https://string-db.org/network/320483.AMF_168 | succinyl-CoA synthetase beta chain (sucC); Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus [...] |
| rpsU protein network | https://string-db.org/network/320483.AMF_169 | 30s ribosomal protein s21 (rpsU); Psort: bacterial cytoplasm --- Certainty= 0.289(Affirmative); COG0828 RpsU ribosomal protein S21. |
| pstS protein network | https://string-db.org/network/320483.AMF_170 | Phosphate ABC transporter, periplasmic phosphate-binding protein; Psort: bacterial outer membrane --- Certainty= 0.239(Affirmative) bacterial periplasmic space --- Certainty= 0.239(Affirmative); [...] |
| msp5 protein network | https://string-db.org/network/320483.AMF_171 | Major surface protein 5 (MSP5); Psort: bacterial inner membrane --- Certainty= 0.391(Affirmative); signalP: Prediction: Signal peptide Signal peptide probability: 0.837 Max cleavage site probabil [...] |
| fabK protein network | https://string-db.org/network/320483.AMF_172 | Enoyl-(acyl-carrier-protein) reductase II; Psort: bacterial cytoplasm --- Certainty= 0.022(Affirmative). |
| cybB protein network | https://string-db.org/network/320483.AMF_173 | COG3038 CybB cytochrome B561. |
| fbpB protein network | https://string-db.org/network/320483.AMF_174 | Iron(III)-transport system permease protein (fbpB); Psort: bacterial inner membrane --- Certainty= 0.673(Affirmative). |
| aprE protein network | https://string-db.org/network/320483.AMF_175 | Alkaline protease secretion protein (aprE); Psort: bacterial inner membrane --- Certainty= 0.569(Affirmative); COG1404 aprE subtilisin-like serine proteases. |
| AMF_176 protein network | https://string-db.org/network/320483.AMF_176 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.326(Affirmative). |
| murD protein network | https://string-db.org/network/320483.AMF_177 | UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD); Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the M [...] |
| tolB protein network | https://string-db.org/network/320483.AMF_178 | TOLB protein precursor (tolB); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. |
| AMF_179 protein network | https://string-db.org/network/320483.AMF_179 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.172(Affirmative); COG0595 Predicted hydrolase of the metallo-beta-lactama [...] |
| AMF_180 protein network | https://string-db.org/network/320483.AMF_180 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.486(Affirmative). |
| AMF_181 protein network | https://string-db.org/network/320483.AMF_181 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.727(Affirmative). |
| rpsL protein network | https://string-db.org/network/320483.AMF_182 | 30S ribosomal protein S12 (rpsL); With S4 and S5 plays an important role in translational accuracy. |
| rpsG protein network | https://string-db.org/network/320483.AMF_183 | 30S ribosomal protein S7 (rpsG); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subun [...] |
| fusA protein network | https://string-db.org/network/320483.AMF_185 | Elongation factor G (fusA); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to th [...] |
| tuf protein network | https://string-db.org/network/320483.AMF_186 | Translation elongation factor Tu (tuf); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. |
| secE protein network | https://string-db.org/network/320483.AMF_187 | Conserved family - SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. |
| nusG protein network | https://string-db.org/network/320483.AMF_188 | Transcription antitermination protein (NusG); Participates in transcription elongation, termination and antitermination. |
| rplK protein network | https://string-db.org/network/320483.AMF_190 | 50S ribosomal protein L11 (rplK); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. |
| rplA protein network | https://string-db.org/network/320483.AMF_191 | Ribosomal protein L1 (rplA); Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. |
| rplJ protein network | https://string-db.org/network/320483.AMF_192 | Ribosomal protein L10 (rplJ); Psort: bacterial cytoplasm --- Certainty= 0.170(Affirmative); COG0244 RplJ ribosomal protein L10. |
| rplL protein network | https://string-db.org/network/320483.AMF_193 | Ribosomal protein L7/L12 (rplL); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the [...] |
| rpoB protein network | https://string-db.org/network/320483.AMF_194 | RNA polymerase beta subunit (rpoB); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rpoC protein network | https://string-db.org/network/320483.AMF_195 | DNA-directed RNA polymerase beta' chain (rpoC); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rnhB protein network | https://string-db.org/network/320483.AMF_196 | Ribonuclease HII (rnhB); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. |
| AMF_197 protein network | https://string-db.org/network/320483.AMF_197 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.102(Affirmative). |
| bioF protein network | https://string-db.org/network/320483.AMF_199 | 8-amino-7-oxononanoate synthase; Psort: bacterial inner membrane --- Certainty= 0.132(Affirmative); COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes. |
| AMF_200 protein network | https://string-db.org/network/320483.AMF_200 | Conserved family - Na+/H+ antiporter; psort: bacterial inner membrane --- Certainty= 0.249(Affirmative). |
| coaX protein network | https://string-db.org/network/320483.AMF_201 | Conserved hypothetical protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. |
| pyrD protein network | https://string-db.org/network/320483.AMF_203 | Dihydroorotate dehydrogenase (pyrD); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. |
| def protein network | https://string-db.org/network/320483.AMF_204 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...] |
| AMF_205 protein network | https://string-db.org/network/320483.AMF_205 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.130(Affirmative); COG0400 Predicted esterase. |
| AMF_206 protein network | https://string-db.org/network/320483.AMF_206 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.370(Affirmative); COG3621 Patatin. |
| pdxH protein network | https://string-db.org/network/320483.AMF_207 | Pyridoxamine 5-phosphate oxidase (pdxH); Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). |
| murE protein network | https://string-db.org/network/320483.AMF_208 | UDP-N-acetylmuramoylalanyl-D-glutamate-- 2,6-diaminopimelate ligase (murE); Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamat [...] |
| AMF_209 protein network | https://string-db.org/network/320483.AMF_209 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative). |
| metC protein network | https://string-db.org/network/320483.AMF_210 | Cystathionine beta-lyase; Psort: bacterial inner membrane --- Certainty= 0.236(Affirmative); COG0626 cystathionine beta-lyases/cystathionine gamma-synthases. |
| bolA protein network | https://string-db.org/network/320483.AMF_211 | bolA like protein (bolA); Psort: bacterial inner membrane --- Certainty= 0.036(Affirmative); COG0271 BolA stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. |
| AMF_212 protein network | https://string-db.org/network/320483.AMF_212 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.204(Affirmative). |
| dnaE protein network | https://string-db.org/network/320483.AMF_213 | DNA polymerase III, alpha subunit (dnaE); Psort: bacterial inner membrane --- Certainty= 0.113(Affirmative); COG0587 DnaE DNA polymerase III alpha subunit. |
| aroA protein network | https://string-db.org/network/320483.AMF_214 | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. |
| sdhC protein network | https://string-db.org/network/320483.AMF_215 | Succinate dehydrogenase cytochrome b556 subunit (sdhC); Psort: bacterial inner membrane --- Certainty= 0.508(Affirmative); COG2009 SdhC succinate dehydrogenase/fumarate reductase cytochrome b sub [...] |
| sdhD protein network | https://string-db.org/network/320483.AMF_217 | Succinate dehyrdrogenase subunit D; Psort: bacterial inner membrane --- Certainty= 0.408(Affirmative); COG2142 SdhD succinate dehydrogenase hydrophobic anchor subunit. |
| AMF_218 protein network | https://string-db.org/network/320483.AMF_218 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.206(Affirmative). |
| thiD protein network | https://string-db.org/network/320483.AMF_219 | Phosphomethylpyrimidine kinase (thiD); Psort: bacterial inner membrane --- Certainty= 0.206(Affirmative); COG0351 ThiD hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. |
| AMF_220 protein network | https://string-db.org/network/320483.AMF_220 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.237(Affirmative); COG0593 ATPase involved in DNA replication initiation; Belon [...] |
| perM protein network | https://string-db.org/network/320483.AMF_221 | Permease perM-like protein (perM); Psort: bacterial inner membrane --- Certainty= 0.531(Affirmative); COG0628 PerM predicted permease. |
| AMF_222 protein network | https://string-db.org/network/320483.AMF_222 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.377(Affirmative); COG2975 Uncharacterized BCR. |
| rpsD protein network | https://string-db.org/network/320483.AMF_223 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. |
| AMF_224 protein network | https://string-db.org/network/320483.AMF_224 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.559(Affirmative); COG2202 PAS/PAC domain. |
| AMF_225 protein network | https://string-db.org/network/320483.AMF_225 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.201(Affirmative). |
| pgpA protein network | https://string-db.org/network/320483.AMF_227 | Phosphatidylglycerophosphatase A (pgpA); Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). |
| AMF_228 protein network | https://string-db.org/network/320483.AMF_228 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.370(Affirmative). |
| tig protein network | https://string-db.org/network/320483.AMF_229 | Trigger factor (tig); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Bel [...] |
| clpP protein network | https://string-db.org/network/320483.AMF_230 | ATP-dependent clp protease proteolytic subunit (clpP); Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the [...] |
| clpX protein network | https://string-db.org/network/320483.AMF_231 | ATP-dependent clp protease ATP-binding subunit (clpX); ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in [...] |
| lon protein network | https://string-db.org/network/320483.AMF_232 | ATP-dependent protease LA (lon); ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Require [...] |
| fmt protein network | https://string-db.org/network/320483.AMF_233 | methionyl-tRNA formyltransferase (fmt); Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formy [...] |
| AMF_234 protein network | https://string-db.org/network/320483.AMF_234 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.011(Affirmative); COG1054 Uncharacterized enzyme related to sulfurtransfe [...] |
| AMF_235 protein network | https://string-db.org/network/320483.AMF_235 | Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/deph [...] |
| thiE protein network | https://string-db.org/network/320483.AMF_236 | Thiamin monophosphate synthase (thiE); Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiami [...] |
| AMF_237 protein network | https://string-db.org/network/320483.AMF_237 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.329(Affirmative); COG1253 Hemolysins and related proteins containing CBS [...] |
| AMF_238 protein network | https://string-db.org/network/320483.AMF_238 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.196(Affirmative); COG0762 Predicted integral membrane protein. |
| ftsK protein network | https://string-db.org/network/320483.AMF_240 | Cell division protein (ftsK); Psort: bacterial inner membrane --- Certainty= 0.291(Affirmative); COG1674 FtsK DNA segregation ATPase FtsK/SpoIIIE and related proteins. |
| AMF_241 protein network | https://string-db.org/network/320483.AMF_241 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.321(Affirmative). |
| argD protein network | https://string-db.org/network/320483.AMF_243 | Acetylornithine aminotransferase (argD); Psort: bacterial cytoplasm --- Certainty= 0.069(Affirmative); COG0160 ArgD PLP-dependent aminotransferases. |
| barA protein network | https://string-db.org/network/320483.AMF_244 | Histidine kinase sensor protein (barA); Psort: bacterial inner membrane --- Certainty= 0.582(Affirmative); COG0642 BaeS signal transduction histidine kinase. |
| AMF_245 protein network | https://string-db.org/network/320483.AMF_245 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.919(Affirmative). |
| tolR protein network | https://string-db.org/network/320483.AMF_246 | TOLR protein (tolR); Psort: bacterial inner membrane --- Certainty= 0.537(Affirmative); COG0848 ExbD biopolymer transport protein. |
| tolQ protein network | https://string-db.org/network/320483.AMF_247 | TOLQ protein (tolQ); Psort: bacterial inner membrane --- Certainty= 0.378(Affirmative); COG0811 TolQ biopolymer transport protein. |
| mutL protein network | https://string-db.org/network/320483.AMF_248 | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matc [...] |
| smf protein network | https://string-db.org/network/320483.AMF_249 | DNA processing protein, chain A dprA (smf); Psort: bacterial cytoplasm --- Certainty= 0.158(Affirmative); COG0758 Smf predicted Rossmann fold nucleotide-binding protein involved in DNA uptake. |
| trmU protein network | https://string-db.org/network/320483.AMF_250 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU); Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. |
| pilT protein network | https://string-db.org/network/320483.AMF_251 | Putative twitching motility protein (pilT); Psort: bacterial inner membrane --- Certainty= 0.170(Affirmative); COG2805 Predicted ATPases involved in pili biogenesis, PilT homologs. |
| fabB protein network | https://string-db.org/network/320483.AMF_252 | 3-oxoacyl-(acyl-carrier-protein) synthase II (fabB); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. |
| acpP protein network | https://string-db.org/network/320483.AMF_253 | Acyl carrier protein (acpP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. |
| AMF_255 protein network | https://string-db.org/network/320483.AMF_255 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Similar to genes annotated as pgpA in E. ruminantium; psort: bacterial inner membrane --- Certainty= 0.455(Affirmative). |
| AMF_256 protein network | https://string-db.org/network/320483.AMF_256 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.164(Affirmative); COG1495 Disulfide bond formation protein DsbB. |
| AMF_258 protein network | https://string-db.org/network/320483.AMF_258 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.330(Affirmative). |
| AMF_259 protein network | https://string-db.org/network/320483.AMF_259 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.102(Affirmative). |
| coq7 protein network | https://string-db.org/network/320483.AMF_261 | Ubiquinone biosynthesis protein (coq7); Psort: bacterial cytoplasm --- Certainty= 0.080(Affirmative); COG2941 CAT5 ubiquinone biosynthesis protein COQ7. |
| AMF_262 protein network | https://string-db.org/network/320483.AMF_262 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.217(Affirmative). |
| AMF_264 protein network | https://string-db.org/network/320483.AMF_264 | Hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.920(Affirmative). |
| AMF_265 protein network | https://string-db.org/network/320483.AMF_265 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.153(Affirmative). |
| AMF_266 protein network | https://string-db.org/network/320483.AMF_266 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.138(Affirmative). |
| AMF_267 protein network | https://string-db.org/network/320483.AMF_267 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative). |
| AMF_268 protein network | https://string-db.org/network/320483.AMF_268 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.117(Affirmative). |
| AMF_269 protein network | https://string-db.org/network/320483.AMF_269 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.293(Affirmative). |
| uvrD protein network | https://string-db.org/network/320483.AMF_271 | DNA helicase II (uvrD); Psort: bacterial inner membrane --- Certainty= 0.132(Affirmative); COG0210 UvrD superfamily I DNA and RNA helicases. |
| AMF_272 protein network | https://string-db.org/network/320483.AMF_272 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.461(Affirmative). |
| gyrA protein network | https://string-db.org/network/320483.AMF_273 | DNA gyrase subunit A (gyrA); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosom [...] |
| nth protein network | https://string-db.org/network/320483.AMF_274 | Endonuclease III (nth); DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving [...] |
| AMF_275 protein network | https://string-db.org/network/320483.AMF_275 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.939(Affirmative). |
| htpG protein network | https://string-db.org/network/320483.AMF_276 | Heat shock protein (htpG); Molecular chaperone. Has ATPase activity. |
| purB protein network | https://string-db.org/network/320483.AMF_279 | Adenylosuccinate lyase protein (purB); Psort: bacterial inner membrane --- Certainty= 0.185(Affirmative); COG0015 PurB adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyas [...] |
| uvrC protein network | https://string-db.org/network/320483.AMF_280 | Excinuclease ABC subunit C (uvrC); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is re [...] |
| birA protein network | https://string-db.org/network/320483.AMF_282 | biotin-(acetyl-CoA carboxylase) (birA); Psort: bacterial inner membrane --- Certainty= 0.145(Affirmative); COG0340 BirA biotin-(acetyl-CoA carboxylase) ligase. |
| gst protein network | https://string-db.org/network/320483.AMF_283 | Glutathione S-transferase (gst); Psort: bacterial cytoplasm --- Certainty= 0.290(Affirmative); COG0625 Gst glutathione-S-transferases. |
| AMF_284 protein network | https://string-db.org/network/320483.AMF_284 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.164(Affirmative). |
| potA protein network | https://string-db.org/network/320483.AMF_285 | Spermidine/putrescine import ATP-binding protein (potA); Psort: bacterial cytoplasm --- Certainty= 0.231(Affirmative); COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase compon [...] |
| recR protein network | https://string-db.org/network/320483.AMF_286 | Recombination protein (recR); May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. |
| znuA protein network | https://string-db.org/network/320483.AMF_287 | High-affinity zinc uptake system protein (znuA); Psort: bacterial inner membrane --- Certainty= 0.251(Affirmative); COG0803 ZnuA ABC-type Mn/Zn transport system, periplasmic Mn/Zn-binding (lipo)p [...] |
| znuC protein network | https://string-db.org/network/320483.AMF_288 | Zinc uptake system ATP-binding protein (znuC); Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC tran [...] |
| ubiB protein network | https://string-db.org/network/320483.AMF_289 | Ubiquinone biosynthesis protein (ubiB); Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB [...] |
| AMF_290 protein network | https://string-db.org/network/320483.AMF_290 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.493(Affirmative). |
| miaB protein network | https://string-db.org/network/320483.AMF_291 | 2-methylthioadenine synthetase (miaB); Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at [...] |
| AMF_293 protein network | https://string-db.org/network/320483.AMF_293 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.020(Affirmative). |
| AMF_294 protein network | https://string-db.org/network/320483.AMF_294 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.629(Affirmative). |
| sucA protein network | https://string-db.org/network/320483.AMF_295 | 2-oxoglutarate dehydrogenase E1 component (sucA); Psort: bacterial cytoplasm --- Certainty= 0.276(Affirmative); COG0567 SucA pyruvate and 2-oxoglutarate dehydrogenases, E1 component. |
| AMF_296 protein network | https://string-db.org/network/320483.AMF_296 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.280(Affirmative). |
| dapA protein network | https://string-db.org/network/320483.AMF_297 | Dihydrodipicolinate synthase (dapA); Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). |
| pkcI protein network | https://string-db.org/network/320483.AMF_299 | Protein kinase C inhibitor 1 (pkcI); Psort: bacterial cytoplasm --- Certainty= 0.185(Affirmative). |
| AMF_300 protein network | https://string-db.org/network/320483.AMF_300 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.143(Affirmative). |
| mutS protein network | https://string-db.org/network/320483.AMF_301 | DNA mismatch repair protein (mutS); This protein is involved in the repair of mismatches in DNA. |
| AMF_302 protein network | https://string-db.org/network/320483.AMF_302 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.160(Affirmative). |
| proP protein network | https://string-db.org/network/320483.AMF_303 | Proline/betaine transporter (proP); High sequence identity to AMF_304 and AMF_309 psort: bacterial inner membrane --- Certainty= 0.518(Affirmative); COG0477 ProP Permeases of the major facilitato [...] |
| proP-2 protein network | https://string-db.org/network/320483.AMF_304 | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_309 Higher sequence similarity to other Anaplasmataceae than AMF_303, lower than AMF_309; psort: bacterial inner memb [...] |
| nadE protein network | https://string-db.org/network/320483.AMF_305 | NH3-dependent NAD+ synthetase protein (nadE); Psort: bacterial inner membrane --- Certainty= 0.172(Affirmative); COG0171 NadE NAD synthase; Belongs to the NAD synthetase family. |
| hemB protein network | https://string-db.org/network/320483.AMF_306 | Delta-aminolevulinic acid dehydratase (hemB); Psort: bacterial inner membrane --- Certainty= 0.202(Affirmative); COG0113 HemB delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. |
| pbpA2 protein network | https://string-db.org/network/320483.AMF_307 | Penicillin-binding protein (pbpA2); Psort: bacterial inner membrane --- Certainty= 0.516(Affirmative); COG0768 FtsI cell division protein FtsI/penicillin-binding protein 2. |
| AMF_308 protein network | https://string-db.org/network/320483.AMF_308 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.274(Affirmative). |
| proP-3 protein network | https://string-db.org/network/320483.AMF_309 | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- [...] |
| ssb protein network | https://string-db.org/network/320483.AMF_310 | Single-strand binding protein (ssb); Psort: bacterial cytoplasm --- Certainty= 0.082(Affirmative); COG0629 Ssb single-stranded DNA-binding protein. |
| mcd protein network | https://string-db.org/network/320483.AMF_311 | malonyl-CoA decarboxylase (mcd); Psort: bacterial cytoplasm --- Certainty= 0.142(Affirmative). |
| gatB protein network | https://string-db.org/network/320483.AMF_312 | glutamyl-tRNA amidotransferase subunit B (gatB); Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) [...] |
| fab1 protein network | https://string-db.org/network/320483.AMF_313 | Enoyl-[acyl-carrier-protein] reductase (fab1); Psort: bacterial cytoplasm --- Certainty= 0.069(Affirmative); COG0623 FabI enoyl-[acyl-carrier-protein] reductase (NADH). |
| dnaA protein network | https://string-db.org/network/320483.AMF_314 | Chromosomal replication initiator protein (dnaA); Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically do [...] |
| AMF_315 protein network | https://string-db.org/network/320483.AMF_315 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.450(Affirmative). |
| nadD protein network | https://string-db.org/network/320483.AMF_316 | Nicotinate-nucleotide adenylyltransferase (nadD); Psort: bacterial inner membrane --- Certainty= 0.268(Affirmative); COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase. |
| pdxJ protein network | https://string-db.org/network/320483.AMF_318 | Pyridoxal phosphate biosynthetic protein (pdxJ); Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl ph [...] |
| dnaX protein network | https://string-db.org/network/320483.AMF_319 | DNA polymerase III subunit gamma; Psort: bacterial cytoplasm --- Certainty= 0.235(Affirmative); COG2812 DnaX DNA polymerase III, gamma/tau subunits. |
| AMF_320 protein network | https://string-db.org/network/320483.AMF_320 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.026(Affirmative); COG0009 Putative translation factor (SUA5). |
| coaE protein network | https://string-db.org/network/320483.AMF_321 | dephospho-CoA kinase (coaE); Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. |
| thiC protein network | https://string-db.org/network/320483.AMF_322 | Thiamin biosynthesis protein (thiC); Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methi [...] |
| AMF_323 protein network | https://string-db.org/network/320483.AMF_323 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.298(Affirmative); COG2840 Uncharacterized BCR. |
| rpoZ protein network | https://string-db.org/network/320483.AMF_324 | DNA-directed RNA polymerase omega subunit (rpoZ); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta [...] |
| AMF_325 protein network | https://string-db.org/network/320483.AMF_325 | Conserved hypothetical protein; Psort: bacterial cytoplasm --- Certainty=0.133(Affirmative). |
| leuS protein network | https://string-db.org/network/320483.AMF_327 | leucyl-tRNA synthetase (leuS); Psort: bacterial cytoplasm --- Certainty= 0.485(Affirmative); COG0495 leuS leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. |
| AMF_328 protein network | https://string-db.org/network/320483.AMF_328 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.333(Affirmative); COG0084 Mg-dependent DNase. |
| pyrF protein network | https://string-db.org/network/320483.AMF_329 | Orotidine 5'-phosphate decarboxylase (pyrF); Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). |
| ccmE protein network | https://string-db.org/network/320483.AMF_330 | Cytochrome c-type biogenesis protein (ccmE); Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes i [...] |
| surE protein network | https://string-db.org/network/320483.AMF_331 | Stationary-phase survival protein (surE); Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. |
| nuoC1 protein network | https://string-db.org/network/320483.AMF_332 | NADH-ubiquinone oxidoreductase subunit (nuoC1); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor f [...] |
| nuoB protein network | https://string-db.org/network/320483.AMF_333 | NADH dehydrogenase I chain B (nuoB); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| nuoA protein network | https://string-db.org/network/320483.AMF_334 | NADH dehydrogenase I chain A (nuoA); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| uvrA protein network | https://string-db.org/network/320483.AMF_335 | Excinuclease ABC subunit A (uvrA); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex comp [...] |
| nusB protein network | https://string-db.org/network/320483.AMF_336 | N utilization substance protein B (nusB); Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequen [...] |
| ribH protein network | https://string-db.org/network/320483.AMF_337 | Riboflavin synthase, beta subunit; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This i [...] |
| yidC protein network | https://string-db.org/network/320483.AMF_339 | 60kD inner-membrane protein (yidC); Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane [...] |
| pssA protein network | https://string-db.org/network/320483.AMF_340 | CDP-diacylglycerol--serine O-phosphatidyltransferase (pssA); Psort: bacterial inner membrane --- Certainty= 0.469(Affirmative); COG1183 PssA phosphatidylserine synthase; Belongs to the CDP-alcoho [...] |
| psd protein network | https://string-db.org/network/320483.AMF_341 | Phosphatidylserine decarboxylase proenzyme (psd); Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). |
| AMF_342 protein network | https://string-db.org/network/320483.AMF_342 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.302(Affirmative); COG0493 NADPH-dependent glutamate synthase beta chain a [...] |
| AMF_343 protein network | https://string-db.org/network/320483.AMF_343 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.248(Affirmative). |
| murG protein network | https://string-db.org/network/320483.AMF_344 | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid interme [...] |
| efp protein network | https://string-db.org/network/320483.AMF_345 | Elongation factor P EF-P (efp); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functio [...] |
| suhB protein network | https://string-db.org/network/320483.AMF_346 | Extragenic suppressor protein suhB (suhB); Psort: bacterial inner membrane --- Certainty= 0.100(Affirmative); COG0483 SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol mon [...] |
| rluC protein network | https://string-db.org/network/320483.AMF_347 | Ribosomal large subunit pseudouridine synthase (rluC); Psort: bacterial inner membrane --- Certainty= 0.174(Affirmative); COG0564 RluA pseudouridylate synthases, 23S RNA-specific; Belongs to the [...] |
| AMF_349 protein network | https://string-db.org/network/320483.AMF_349 | Psort: bacterial cytoplasm --- Certainty= 0.331(Affirmative); COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. |
| AMF_350 protein network | https://string-db.org/network/320483.AMF_350 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.790(Affirmative). |
| AMF_351 protein network | https://string-db.org/network/320483.AMF_351 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.013(Affirmative). |
| gdh protein network | https://string-db.org/network/320483.AMF_352 | NAD-specific glutamate dehydrogenase; Possible frameshift with AMF_351; psort: bacterial inner membrane --- Certainty= 0.134(Affirmative); COG2902 NAD-specific glutamate dehydrogenase. |
| AMF_353 protein network | https://string-db.org/network/320483.AMF_353 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.194(Affirmative). |
| cysS protein network | https://string-db.org/network/320483.AMF_354 | cysteinyl-tRNA synthetase (cysS); Psort: bacterial cytoplasm --- Certainty= 0.184(Affirmative); COG0215 CysS cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. |
| nrdB protein network | https://string-db.org/network/320483.AMF_355 | Ribonuceoside-diphosphate reductase beta chain (nrdB); Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotid [...] |
| AMF_357 protein network | https://string-db.org/network/320483.AMF_357 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.448(Affirmative); COG0526 Thiol-disulfide isomerase and thioredoxins. |
| AMF_359 protein network | https://string-db.org/network/320483.AMF_359 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.126(Affirmative). |
| AMF_360 protein network | https://string-db.org/network/320483.AMF_360 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.186(Affirmative); COG1565 Uncharacterized ACR. |
| dnaG protein network | https://string-db.org/network/320483.AMF_361 | DNA primase (dnaG); RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. |
| rpoD protein network | https://string-db.org/network/320483.AMF_363 | RNA polymerase sigma factor (rpoD); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the [...] |
| nifR3 protein network | https://string-db.org/network/320483.AMF_365 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; [...] |
| ispE protein network | https://string-db.org/network/320483.AMF_366 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (ispE); Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. |
| cutA protein network | https://string-db.org/network/320483.AMF_368 | Periplasmic divalent cation tolerance protein (cutA); Psort: bacterial cytoplasm --- Certainty= 0.170(Affirmative); COG1324 CutA uncharacterized protein involved in tolerance to divalent cations. |
| dhkA protein network | https://string-db.org/network/320483.AMF_369 | Sensory box histidine kinase/response regulator (dhkA); Psort: bacterial inner membrane --- Certainty= 0.491(Affirmative); COG0642 Signal transduction histidine kinase. |
| AMF_370 protein network | https://string-db.org/network/320483.AMF_370 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.130(Affirmative); COG0500 SAM-dependent methyltransferases. |
| AMF_371 protein network | https://string-db.org/network/320483.AMF_371 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.388(Affirmative). |
| nnrD protein network | https://string-db.org/network/320483.AMF_372 | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which i [...] |
| topA protein network | https://string-db.org/network/320483.AMF_373 | DNA topoisomerase I (topA); Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one str [...] |
| AMF_374 protein network | https://string-db.org/network/320483.AMF_374 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.770(Affirmative). |
| acpS protein network | https://string-db.org/network/320483.AMF_375 | Holo-(acyl-carrier-protein) synthase (acpS); Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS famil [...] |
| proS protein network | https://string-db.org/network/320483.AMF_377 | prolyl-tRNA synthetase (proS); Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end [...] |
| AMF_378 protein network | https://string-db.org/network/320483.AMF_378 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.805(Affirmative). |
| coaD protein network | https://string-db.org/network/320483.AMF_379 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD [...] |
| trxB protein network | https://string-db.org/network/320483.AMF_380 | Thioredoxin reductase (trxB); Psort: bacterial cytoplasm --- Certainty= 0.081(Affirmative); COG0492 TrxB thioredoxin reductase. |
| tdpX1 protein network | https://string-db.org/network/320483.AMF_381 | Thioredoxin peroxidase 1 (tdpX1); Psort: bacterial cytoplasm --- Certainty= 0.065(Affirmative); COG0450 AhpC peroxiredoxin. |
| aatA protein network | https://string-db.org/network/320483.AMF_382 | Aspartate aminotransferase A (aatA); Psort: bacterial cytoplasm --- Certainty= 0.178(Affirmative); COG0075 - serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. |
| ppiD protein network | https://string-db.org/network/320483.AMF_383 | Peptidyl-prolyl cis-trans isomerase D (ppiD); Psort: bacterial inner membrane --- Certainty= 0.601(Affirmative); COG0760 SurA Parvulin-like peptidyl-prolyl isomerase. |
| AMF_384 protein network | https://string-db.org/network/320483.AMF_384 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.014(Affirmative); COG1214 Inactive homologs of metal-dependent proteases, [...] |
| AMF_385 protein network | https://string-db.org/network/320483.AMF_385 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.561(Affirmative); Belongs to the dicarboxylate/amino acid:cation symporte [...] |
| AMF_386 protein network | https://string-db.org/network/320483.AMF_386 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.565(Affirmative); COG1301 Na+/H+-dicarboxylate symporters; Belongs to the [...] |
| mreC protein network | https://string-db.org/network/320483.AMF_387 | Rod shape determining protein (mreC); Psort: bacterial inner membrane --- Certainty= 0.206(Affirmative); COG1792 MreC rod shape-determining protein. |
| mreB protein network | https://string-db.org/network/320483.AMF_388 | Rod shape-determining protein (mreB); Psort: bacterial inner membrane --- Certainty= 0.270(Affirmative); COG1077 MreB HSP70 class molecular chaperones involved in cell morphogenesis. |
| truB protein network | https://string-db.org/network/320483.AMF_389 | tRNA pseudouridine 55 synthase (truB); Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 sub [...] |
| rpsO protein network | https://string-db.org/network/320483.AMF_390 | 30S ribosomal protein S15 (rpsO); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridgi [...] |
| pnp protein network | https://string-db.org/network/320483.AMF_391 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. |
| AMF_392 protein network | https://string-db.org/network/320483.AMF_392 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.264(Affirmative); COG0500 SAM-dependent methyltransferases. |
| lepA protein network | https://string-db.org/network/320483.AMF_393 | GTP binding protein (lepA); Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-co [...] |
| msp1a protein network | https://string-db.org/network/320483.AMF_395 | Major surface protein 1a (MSP1A); Member of msp1 superfamily; psort: bacterial inner membrane --- Certainty= 0.567(Affirmative). |
| mlp3 protein network | https://string-db.org/network/320483.AMF_398 | Major surface protein 1a-like protein 3 (MLP3); Member of msp1 superfamily; psort: bacterial inner membrane --- Certainty= 0.546(Affirmative). |
| mlp4 protein network | https://string-db.org/network/320483.AMF_399 | Major surface protein 1a-like protein 4 (MLP4); Member of msp1 superfamily; psort: bacterial inner membrane --- Certainty= 0.563(Affirmative). |
| AMF_400 protein network | https://string-db.org/network/320483.AMF_400 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.635(Affirmative). |
| AMF_401 protein network | https://string-db.org/network/320483.AMF_401 | Hypothetical protein called by Glimmer 2; Some similarity to AMF_408 and to AMF_395; psort: bacterial inner membrane --- Certainty= 0.688(Affirmative). |
| AMF_402 protein network | https://string-db.org/network/320483.AMF_402 | Hypothetical protein called by Glimmer 2; Some similarity to AMF_408; psort: bacterial cytoplasm --- Certainty= 0.324(Affirmative). |
| AMF_403 protein network | https://string-db.org/network/320483.AMF_403 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_405, AMF_406, AMF_407, AMF_408 psort: bacterial inner membrane --- Certainty= 0.452(Affirmative). |
| AMF_405 protein network | https://string-db.org/network/320483.AMF_405 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_403, AMF_406, AMF_407, AMF_404 psort: bacterial periplasmic space --- Certainty= 0.950(Affirmative). |
| AMF_406 protein network | https://string-db.org/network/320483.AMF_406 | Hypothetical protein called by Glimmer 2; Significant sequence similarity with AMF_405, AMF_403, AMF_407, and AMF_404 ; psort: bacterial inner membrane --- Certainty= 0.699(Affirmative). |
| AMF_407 protein network | https://string-db.org/network/320483.AMF_407 | Hypothetical protein called by Glimmer 2; Significant sequence similarity to AMF_406, AMF_405, AMF_403, and AMF_404 ; psort: bacterial periplasmic space --- Certainty= 0.839(Affirmative). |
| AMF_408 protein network | https://string-db.org/network/320483.AMF_408 | Hypothetical protein called by Glimmer 2; Significant sequence similarity with AMF_402, AMF_401, and AMF_403 ; psort: bacterial inner membrane --- Certainty= 0.722(Affirmative). |
| thiL protein network | https://string-db.org/network/320483.AMF_409 | Thiamin-monophosphate kinase (thiL); Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to t [...] |
| AMF_412 protein network | https://string-db.org/network/320483.AMF_412 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.739(Affirmative); COG1295 Predicted multitransmembrane protein. |
| bioA protein network | https://string-db.org/network/320483.AMF_413 | Psort: bacterial cytoplasm --- Certainty= 0.133(Affirmative); COG0161 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotrans [...] |
| AMF_414 protein network | https://string-db.org/network/320483.AMF_414 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.154(Affirmative). |
| ksgA protein network | https://string-db.org/network/320483.AMF_415 | Dimethyladenosine transferase (ksgA); Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May p [...] |
| tpiA protein network | https://string-db.org/network/320483.AMF_416 | Triosephosphate isomerase (tpiA); Psort: bacterial inner membrane --- Certainty= 0.251(Affirmative); COG0149 TpiA triosephosphate isomerase. |
| AMF_417 protein network | https://string-db.org/network/320483.AMF_417 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; C-terminal end matches AMF_428; psort: bacterial periplasmic space --- Certainty= 0.294(Affirmative); COG2358 Predicted pe [...] |
| gcp protein network | https://string-db.org/network/320483.AMF_418 | O-sialoglycoprotein endopeptidase (gcp); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involve [...] |
| AMF_419 protein network | https://string-db.org/network/320483.AMF_419 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.463(Affirmative); COG1714 Uncharacterized membrane protein/domain. |
| folB protein network | https://string-db.org/network/320483.AMF_420 | Dihydroneopterin aldolase (folB); Psort: bacterial inner membrane --- Certainty= 0.033(Affirmative); COG1539 FolB dihydroneopterin aldolase. |
| mdh protein network | https://string-db.org/network/320483.AMF_421 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. |
| ubiG protein network | https://string-db.org/network/320483.AMF_422 | 3-demethylubiquinone-9 3-methyltransferase (UBIG); O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamil [...] |
| infB protein network | https://string-db.org/network/320483.AMF_423 | Translation initiation factor IF-2; Psort: bacterial cytoplasm --- Certainty= 0.078(Affirmative); COG0532 translation initiation factor 2 (GTPase). |
| AMF_424 protein network | https://string-db.org/network/320483.AMF_424 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.197(Affirmative). |
| rpiB protein network | https://string-db.org/network/320483.AMF_425 | Ribose 5-phosphate isomerase (RpiB); Psort: bacterial inner membrane --- Certainty= 0.132(Affirmative); COG0698 ribose 5-phosphate isomerase. |
| ubiG-2 protein network | https://string-db.org/network/320483.AMF_426 | 3-demethylubiquinone-9 3-methyltransferase (UBIG); O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamil [...] |
| gcp-2 protein network | https://string-db.org/network/320483.AMF_427 | O-sialoglycoprotein endopeptidase (gcp); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involve [...] |
| AMF_428 protein network | https://string-db.org/network/320483.AMF_428 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; 65/65 identities with the C-terminal end of AMF_417 (from AA 275-339); psort: bacterial cytoplasm --- Certainty= 0.077(Aff [...] |
| AMF_429 protein network | https://string-db.org/network/320483.AMF_429 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.274(Affirmative). |
| AMF_430 protein network | https://string-db.org/network/320483.AMF_430 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.361(Affirmative). |
| AMF_431 protein network | https://string-db.org/network/320483.AMF_431 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.272(Affirmative). |
| AMF_432 protein network | https://string-db.org/network/320483.AMF_432 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.161(Affirmative). |
| AMF_433 protein network | https://string-db.org/network/320483.AMF_433 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.183(Affirmative). |
| AMF_434 protein network | https://string-db.org/network/320483.AMF_434 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.292(Affirmative). |
| putA protein network | https://string-db.org/network/320483.AMF_435 | 1-pyrroline-5-carboxylate dehydrogenase (putA); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. |
| fabG protein network | https://string-db.org/network/320483.AMF_436 | 3-oxoacyl-reductase (fabG); Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty aci [...] |
| putA-2 protein network | https://string-db.org/network/320483.AMF_438 | 1-pyrroline-5-carboxylate dehydrogenase (putA); N-terminal end of AMF_435 (putA); psort: bacterial cytoplasm --- Certainty= 0.539(Affirmative); COG1012 PutA NAD-dependent aldehyde dehydrogenase. |
| rlpA protein network | https://string-db.org/network/320483.AMF_440 | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. |
| xthA2 protein network | https://string-db.org/network/320483.AMF_441 | Exodeoxyribonuclease III (xthA2); Psort: bacterial cytoplasm --- Certainty= 0.293(Affirmative); COG0708 XthA exonuclease III. |
| AMF_442 protein network | https://string-db.org/network/320483.AMF_442 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.138(Affirmative). |
| rpmJ protein network | https://string-db.org/network/320483.AMF_443 | Large subunit ribosomal protein L36 (rpmJ); Psort: bacterial cytoplasm --- Certainty= 0.021(Affirmative); COG0257 RpmJ ribosomal protein L36. |
| AMF_444 protein network | https://string-db.org/network/320483.AMF_444 | Conserved family - Septum formation initiator; psort: bacterial inner membrane --- Certainty= 0.399(Affirmative). |
| AMF_445 protein network | https://string-db.org/network/320483.AMF_445 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.503(Affirmative). |
| rpmA protein network | https://string-db.org/network/320483.AMF_446 | 50S ribosomal protein L27 (rpmA); Psort: bacterial cytoplasm --- Certainty= 0.450(Affirmative); COG0211 RpmA ribosomal protein L27. |
| rplU protein network | https://string-db.org/network/320483.AMF_447 | 50S ribosomal protein L21 (rplU); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. |
| eno protein network | https://string-db.org/network/320483.AMF_448 | Enolase 1 (2-phosphoglycerate dehydratase 1) (eno); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via gl [...] |
| hflX protein network | https://string-db.org/network/320483.AMF_449 | Putative GTP binding protein (hflX); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rat [...] |
| purA protein network | https://string-db.org/network/320483.AMF_450 | Adenylosuccinate synthetase (purA); C-terminal end of the full-length purA; psort: bacterial cytoplasm --- Certainty= 0.325(Affirmative); COG0104 PurA Adenylosuccinate synthase. |
| AMF_451 protein network | https://string-db.org/network/320483.AMF_451 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.266(Affirmative). |
| mraW protein network | https://string-db.org/network/320483.AMF_452 | S-adenosyl-methyltransferase (mraW); Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. |
| ygfA protein network | https://string-db.org/network/320483.AMF_453 | 5-formyltetrahydrofolate cyclo-ligase; Psort: bacterial cytoplasm --- Certainty= 0.396(Affirmative); COG0212 5-formyltetrahydrofolate cyclo-ligase. |
| AMF_457 protein network | https://string-db.org/network/320483.AMF_457 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.582(Affirmative). |
| AMF_458 protein network | https://string-db.org/network/320483.AMF_458 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.359(Affirmative). |
| AMF_459 protein network | https://string-db.org/network/320483.AMF_459 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.423(Affirmative). |
| AMF_460 protein network | https://string-db.org/network/320483.AMF_460 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.614(Affirmative). |
| trxB2 protein network | https://string-db.org/network/320483.AMF_461 | Thioredoxin reductase (trxB2); Psort: bacterial inner membrane --- Certainty= 0.170(Affirmative); COG0492 TrxB thioredoxin reductase. |
| pmbA protein network | https://string-db.org/network/320483.AMF_462 | pmbA protein (pmbA); Psort: bacterial cytoplasm --- Certainty= 0.121(Affirmative); COG0312 TldD predicted Zn-dependent proteases and their inactivated homologs. |
| folE protein network | https://string-db.org/network/320483.AMF_463 | GTP cyclohydrolase I (folE); Psort: bacterial inner membrane --- Certainty= 0.174(Affirmative); COG0302 FolE GTP cyclohydrolase I; Belongs to the GTP cyclohydrolase I family. |
| atpG protein network | https://string-db.org/network/320483.AMF_464 | ATP synthase gamma chain (atpG); Psort: bacterial cytoplasm --- Certainty= 0.154(Affirmative); COG0224 AtpG F0F1-type ATP synthase gamma subunit. |
| nuoD protein network | https://string-db.org/network/320483.AMF_465 | NADH dehydrogenase chain D (nuoD); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme [...] |
| nuoE protein network | https://string-db.org/network/320483.AMF_466 | NADH dehydrogenase I chain E (nuoE); Psort: bacterial cytoplasm --- Certainty= 0.446(Affirmative); COG1905 NuoE NADH:ubiquinone oxidoreductase 24 kD subunit. |
| dnaQ protein network | https://string-db.org/network/320483.AMF_467 | DNA polymerase III, epsilon chain (dnaQ); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing [...] |
| AMF_468 protein network | https://string-db.org/network/320483.AMF_468 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.102(Affirmative); COG0606 Predicted ATPase with chaperone activity. |
| AMF_472 protein network | https://string-db.org/network/320483.AMF_472 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.358(Affirmative). |
| rpoH protein network | https://string-db.org/network/320483.AMF_473 | RNA polymerase sigma-32 factor (rpoH); Psort: bacterial cytoplasm --- Certainty= 0.052(Affirmative); COG0568 RpoD DNA-directed RNA polymerase sigma subunits (sigma70/sigma32); Belongs to the sigm [...] |
| AMF_474 protein network | https://string-db.org/network/320483.AMF_474 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.307(Affirmative). |
| AMF_475 protein network | https://string-db.org/network/320483.AMF_475 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.122(Affirmative). |
| AMF_476 protein network | https://string-db.org/network/320483.AMF_476 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.192(Affirmative). |
| nuoH protein network | https://string-db.org/network/320483.AMF_477 | NADH dehydrogenase I chain H (nuoH); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| nuoG protein network | https://string-db.org/network/320483.AMF_478 | NADH dehydrogenase I chain G (nuoG); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translo [...] |
| AMF_479 protein network | https://string-db.org/network/320483.AMF_479 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.578(Affirmative). |
| gyrB2 protein network | https://string-db.org/network/320483.AMF_480 | DNA gyrase subunit B (gyrB2); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromoso [...] |
| ubiX protein network | https://string-db.org/network/320483.AMF_481 | 3-octaprenyl-4-hydroxybenzoate carboxyl-lyase (ubiX); Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid deca [...] |
| AMF_482 protein network | https://string-db.org/network/320483.AMF_482 | Conserved hypothetical protein; Possible subunit of a heme lyase. |
| AMF_483 protein network | https://string-db.org/network/320483.AMF_483 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.323(Affirmative). |
| adx1 protein network | https://string-db.org/network/320483.AMF_484 | Ferredoxin [2Fe-2S] adrenodoxin-like precursor adx1 (adx1); Psort: bacterial cytoplasm --- Certainty= 0.209(Affirmative); COG0633 Fdx ferredoxin. |
| hscA protein network | https://string-db.org/network/320483.AMF_485 | Heat shock protein (hscA); Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. |
| hscB protein network | https://string-db.org/network/320483.AMF_486 | Chaperone protein (hscB); Psort: bacterial cytoplasm --- Certainty= 0.094(Affirmative); COG1076 DjlA DnaJ-domain-containing proteins 1. |
| AMF_487 protein network | https://string-db.org/network/320483.AMF_487 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.215(Affirmative); COG0316 Uncharacterized ACR; Belongs to the HesB/IscA family [...] |
| nifU protein network | https://string-db.org/network/320483.AMF_488 | Iron-sulfur cofactor synthesis protein (nifU); A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build an [...] |
| nifS protein network | https://string-db.org/network/320483.AMF_489 | Cysteine desulfurase (nifS) (duplicated gene); Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes [...] |
| nifS-2 protein network | https://string-db.org/network/320483.AMF_490 | Putative cystine defulfurase (nifS-like protein); Duplicated gene; Similar to AMF_489; psort: bacterial inner membrane --- Certainty= 0.119(Affirmative); COG1104 cysteine sulfinate desulfinase/cy [...] |
| AMF_491 protein network | https://string-db.org/network/320483.AMF_491 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.242(Affirmative); COG2945 Predicted hydrolase of the alpha/beta superfamily. |
| lysS protein network | https://string-db.org/network/320483.AMF_492 | lysyl-tRNA synthetase (lysS); Psort: bacterial inner membrane --- Certainty= 0.126(Affirmative); COG1190 LysU lysyl-tRNA synthetase class II; Belongs to the class-I aminoacyl-tRNA synthetase fami [...] |
| AMF_493 protein network | https://string-db.org/network/320483.AMF_493 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.790(Affirmative). |
| truA protein network | https://string-db.org/network/320483.AMF_494 | tRNA pseudouridylate synthase A (truA); Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. |
| pyrB protein network | https://string-db.org/network/320483.AMF_495 | Aspartate carbamoyltransferase pyrB (pyrB); Psort: bacterial inner membrane --- Certainty= 0.119(Affirmative); COG0540 PyrB aspartate carbamoyltransferase, catalytic chain; Belongs to the asparta [...] |
| AMF_498 protein network | https://string-db.org/network/320483.AMF_498 | Conserved hypothetical protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. |
| atpC protein network | https://string-db.org/network/320483.AMF_499 | ATP synthase epsilon chain atpC (atpC); Psort: bacterial inner membrane --- Certainty= 0.162(Affirmative); COG0355 AtpC F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit). |
| atpD protein network | https://string-db.org/network/320483.AMF_500 | ATP synthase beta chain (atpD); Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPas [...] |
| mgtE protein network | https://string-db.org/network/320483.AMF_501 | Magnesium transporter (mgtE); Acts as a magnesium transporter. |
| ftsJ protein network | https://string-db.org/network/320483.AMF_502 | Cell division protein (ftsJ); Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. |
| AMF_503 protein network | https://string-db.org/network/320483.AMF_503 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_504; psort: bacterial periplasmic space --- Certainty= 0.939(Affirmative). |
| AMF_504 protein network | https://string-db.org/network/320483.AMF_504 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_503, the middle of AMF_735; psort: bacterial inner membrane --- Certainty= 0.501(Affirmative). |
| AMF_505 protein network | https://string-db.org/network/320483.AMF_505 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_209, AMF_571, AMF_735, and AMF_790 ; psort: bacterial inner membrane --- Certainty= 0.539(Affirmative). |
| AMF_509 protein network | https://string-db.org/network/320483.AMF_509 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_505, AMF_571, AMF_735, AMF_790 ; psort: bacterial inner membrane --- Certainty= 0.862(Affirmative). |
| argS protein network | https://string-db.org/network/320483.AMF_510 | arginyl-tRNA synthetase (argS); Psort: bacterial inner membrane --- Certainty= 0.380(Affirmative); COG0018 ArgS arginyl-tRNA synthetase. |
| recO protein network | https://string-db.org/network/320483.AMF_511 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. |
| AMF_512 protein network | https://string-db.org/network/320483.AMF_512 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative). |
| AMF_513 protein network | https://string-db.org/network/320483.AMF_513 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.680(Affirmative). |
| ileS protein network | https://string-db.org/network/320483.AMF_514 | isoleucine-tRNA ligase (ileS); Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid su [...] |
| bcp protein network | https://string-db.org/network/320483.AMF_515 | Putative peroxiredoxin (bcp); Psort: bacterial cytoplasm --- Certainty= 0.340(Affirmative); COG1225 Bcp Peroxiredoxin. |
| AMF_516 protein network | https://string-db.org/network/320483.AMF_516 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. |
| AMF_518 protein network | https://string-db.org/network/320483.AMF_518 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.556(Affirmative). |
| prfB protein network | https://string-db.org/network/320483.AMF_519 | Peptide chain release factor 2 (prfB); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. |
| AMF_520 protein network | https://string-db.org/network/320483.AMF_520 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.177(Affirmative); COG0217 Uncharacterized ACR. |
| gatA protein network | https://string-db.org/network/320483.AMF_521 | glutamyl-tRNA amidotransferase chain A (gatA); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-t [...] |
| folC protein network | https://string-db.org/network/320483.AMF_522 | Folylpolyglutamate synthase (folC); Psort: bacterial inner membrane --- Certainty= 0.095(Affirmative); COG0285 FolC folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. |
| hemC protein network | https://string-db.org/network/320483.AMF_523 | Porphobilinogen deaminase (hemC); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. |
| murB protein network | https://string-db.org/network/320483.AMF_524 | UDP-N-acetylenolpyruvoylglucosamine reductase (murB); Cell wall formation. |
| ankA protein network | https://string-db.org/network/320483.AMF_526 | Ankyrin (ankA); Psort: bacterial cytoplasm --- Certainty= 0.332(Affirmative); COG0666 Arp ankyrin repeat proteins. |
| nuoI protein network | https://string-db.org/network/320483.AMF_527 | NADH dehydrogenase I chain I (nuoI); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| lepB protein network | https://string-db.org/network/320483.AMF_528 | Signal peptidase I (lepB); Psort: bacterial inner membrane --- Certainty= 0.147(Affirmative); COG0681 LepB signal peptidase I; Belongs to the peptidase S26 family. |
| AMF_529 protein network | https://string-db.org/network/320483.AMF_529 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.161(Affirmative); COG0316 Uncharacterized ACR. |
| AMF_530 protein network | https://string-db.org/network/320483.AMF_530 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.172(Affirmative). |
| AMF_535 protein network | https://string-db.org/network/320483.AMF_535 | ORF Y; Psort: bacterial outer membrane --- Certainty= 0.676(Affirmative). |
| AMF_536 protein network | https://string-db.org/network/320483.AMF_536 | ORF X; Psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). |
| typA protein network | https://string-db.org/network/320483.AMF_537 | GTP-binding protein TypA (typA); Psort: bacterial inner membrane --- Certainty= 0.157(Affirmative); COG1217 TypA predicted membrane GTPase involved in stress response. |
| clpA protein network | https://string-db.org/network/320483.AMF_538 | ATP-dependent clp protease ATP-binding subunit (clpA); Psort: bacterial cytoplasm --- Certainty= 0.164(Affirmative); COG0542 ClpA ATPases with chaperone activity, ATP-binding subunit; Belongs to [...] |
| terC protein network | https://string-db.org/network/320483.AMF_540 | Membrane protein (TerC); Psort: bacterial inner membrane --- Certainty= 0.607(Affirmative); COG0861 membrane protein TerC, possibly involved in tellurium resistance. |
| rbfA protein network | https://string-db.org/network/320483.AMF_541 | Ribosome-binding factor A (rbfA); One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits [...] |
| infB-2 protein network | https://string-db.org/network/320483.AMF_542 | Translation initiation factor IF-2 (infB); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its bind [...] |
| nusA protein network | https://string-db.org/network/320483.AMF_543 | Transcription termination factor nusA (nusA); Participates in both transcription termination and antitermination. |
| acrD protein network | https://string-db.org/network/320483.AMF_544 | Acriflavin resistance protein D (acrD); Psort: bacterial inner membrane --- Certainty= 0.722(Affirmative); COG0841 AcrB cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell div [...] |
| tatC protein network | https://string-db.org/network/320483.AMF_545 | Sec-independent protein translocase protein tatC (tatC); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine moti [...] |
| gcpE protein network | https://string-db.org/network/320483.AMF_546 | Peptidoglycan acetylation protein (gcpE); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. |
| AMF_547 protein network | https://string-db.org/network/320483.AMF_547 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.217(Affirmative). |
| dxr protein network | https://string-db.org/network/320483.AMF_548 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase (dxr); Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (ME [...] |
| nuoN1 protein network | https://string-db.org/network/320483.AMF_549 | NADH dehydrogenase I, N chain (nuoN1); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the en [...] |
| nuoM protein network | https://string-db.org/network/320483.AMF_550 | NADH dehydrogenase I chain M (nuoM); Psort: bacterial inner membrane --- Certainty= 0.711(Affirmative); COG1008 NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M). |
| nuoL protein network | https://string-db.org/network/320483.AMF_551 | NADH dehydrogenase I chain L (nuoL); Psort: bacterial inner membrane --- Certainty= 0.576(Affirmative); COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antipor [...] |
| nuoK protein network | https://string-db.org/network/320483.AMF_552 | NADH dehydrogenase I chain K (nuoK); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| nuoJ protein network | https://string-db.org/network/320483.AMF_553 | NADH dehydrogenase I chain J (nuoJ); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translo [...] |
| nuoF protein network | https://string-db.org/network/320483.AMF_555 | NADH dehydrogenase I chain F (nuoF); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit fami [...] |
| fadB protein network | https://string-db.org/network/320483.AMF_556 | 3-hydroxyacyl-COA dehydrogenase bO272.3 (fadB); Psort: bacterial inner membrane --- Certainty= 0.005(Affirmative); COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase. |
| AMF_557 protein network | https://string-db.org/network/320483.AMF_557 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.287(Affirmative). |
| miaA protein network | https://string-db.org/network/320483.AMF_558 | tRNA isopentenylpyrophosphate transferase (miaA); Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the [...] |
| AMF_560 protein network | https://string-db.org/network/320483.AMF_560 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Possible type IV secretion system protein (virB8); psort: bacterial inner membrane --- Certainty= 0.510(Affirmative). |
| AMF_561 protein network | https://string-db.org/network/320483.AMF_561 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.304(Affirmative); Uncharacterized BCR. |
| serS protein network | https://string-db.org/network/320483.AMF_562 | seryl-tRNA synthetase (serS); Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be f [...] |
| AMF_563 protein network | https://string-db.org/network/320483.AMF_563 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.416(Affirmative). |
| hemF protein network | https://string-db.org/network/320483.AMF_564 | Coproporphyrinogen III oxidase (hemF); Psort: bacterial cytoplasm --- Certainty= 0.612(Affirmative); COG0408 HemF coproporphyrinogen III oxidase. |
| agk protein network | https://string-db.org/network/320483.AMF_565 | Acetylglutamate kinase (agk); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. |
| engB protein network | https://string-db.org/network/320483.AMF_566 | Probable GTP-binding protein engB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. E [...] |
| prfA protein network | https://string-db.org/network/320483.AMF_568 | Peptide chain release factor 1 (prfA); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. |
| pccB protein network | https://string-db.org/network/320483.AMF_569 | propionyl-COA carboxylase beta chain precursor (pccB); Psort: bacterial inner membrane --- Certainty= 0.042(Affirmative); COG0825 AccA Acetyl-CoA carboxylase alpha subunit. |
| fpg protein network | https://string-db.org/network/320483.AMF_570 | formamidopyrimidine-DNA glycosylase (fpg); Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. [...] |
| AMF_571 protein network | https://string-db.org/network/320483.AMF_571 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_505, AMF_735, AMF_509, AMF_509, and AMF_790 ; psort: bacterial inner membrane --- Certainty= 0.586(Affirmative). |
| gltX2 protein network | https://string-db.org/network/320483.AMF_572 | glutamyl-tRNA synthetase (gltX2); Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the accep [...] |
| AMF_573 protein network | https://string-db.org/network/320483.AMF_573 | Hypothetical protein called by Glimmer 2; similar to the middle of AMF_507 (AAs 505 to 577); psort: bacterial cytoplasm --- Certainty= 0.154(Affirmative). |
| AMF_575 protein network | https://string-db.org/network/320483.AMF_575 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.936(Affirmative). |
| AMF_576 protein network | https://string-db.org/network/320483.AMF_576 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; AMF577 appears to be a duplication of the C terminal end of this gene; psort: bacterial inner membrane --- Certainty= 0.19 [...] |
| AMF_577 protein network | https://string-db.org/network/320483.AMF_577 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Appears to be a duplication of the C-terminal end of AMF_576 ; psort: bacterial inner membrane --- Certainty= 0.225(Affirm [...] |
| petC protein network | https://string-db.org/network/320483.AMF_578 | Cytochrome c1, heme protein precursor; Psort: bacterial inner membrane --- Certainty= 0.317(Affirmative); COG2857 CYT1 cytochrome c1. |
| petB protein network | https://string-db.org/network/320483.AMF_580 | Cytochrome B (petB); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential c [...] |
| petA protein network | https://string-db.org/network/320483.AMF_581 | Cytochrome B6-F complex iron-sulfur subunit (petA); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates [...] |
| petA-2 protein network | https://string-db.org/network/320483.AMF_582 | Cytochrome B6-F complex iron-sulfur subunit (petA); Psort: bacterial cytoplasm --- Certainty= 0.295(Affirmative); split domain; COG0723 QcrA Rieske Fe-S protein. |
| AMF_583 protein network | https://string-db.org/network/320483.AMF_583 | Hypothetical protein called by Glimmer 2; psort: bacterial membrane --- Certainty= 0.421(Affirmative). |
| znuB protein network | https://string-db.org/network/320483.AMF_584 | Zinc ABC transporter, permease protein (znuB); Psort: bacterial inner membrane --- Certainty= 0.590(Affirmative); COG1108 ZnuB ABC-type Mn2+/Zn2+ transport systems, permease components. |
| AMF_585 protein network | https://string-db.org/network/320483.AMF_585 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.154(Affirmative). |
| tsf protein network | https://string-db.org/network/320483.AMF_586 | Translation elongation factor EF-Ts (tsf); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hy [...] |
| rpsB protein network | https://string-db.org/network/320483.AMF_587 | 30S ribosomal protein S2 (rpsB); Psort: bacterial inner membrane --- Certainty= 0.104(Affirmative); COG0052 RpsB ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. |
| maf protein network | https://string-db.org/network/320483.AMF_588 | Maf protein (maf); Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. |
| infA protein network | https://string-db.org/network/320483.AMF_589 | Translation initiation factor IF-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmet [...] |
| hlyD protein network | https://string-db.org/network/320483.AMF_590 | Putative secretion protein hlyD; Psort: bacterial cytoplasm --- Certainty= 0.244(Affirmative); COG0845 AcrA Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [...] |
| lpdA protein network | https://string-db.org/network/320483.AMF_591 | Dihydrolipoamide dehydrogenase (lpdA); Psort: bacterial membrane --- Certainty= 0.512(Affirmative); COG1249 Lpd dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes. |
| AMF_592 protein network | https://string-db.org/network/320483.AMF_592 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.157(Affirmative); COG1520 Uncharacterized proteins of WD40-like repeat fa [...] |
| engA protein network | https://string-db.org/network/320483.AMF_593 | GTP-binding protein (engA); GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) [...] |
| yibO protein network | https://string-db.org/network/320483.AMF_594 | 2,3-bisphosphoglycerate-independent phosphoglycerol mutase (yibO); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. |
| carA protein network | https://string-db.org/network/320483.AMF_595 | Carbamoyl-phosphate synthase, small chain (carA); Psort: bacterial inner membrane --- Certainty= 0.210(Affirmative); COG0505 CarA carbamoylphosphate synthase small subunit; Belongs to the CarA fa [...] |
| lytB protein network | https://string-db.org/network/320483.AMF_597 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (lytB); Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and d [...] |
| dut protein network | https://string-db.org/network/320483.AMF_598 | Deoxyuridine 5'triphosphate nucleotidohydrolase (dut); This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the in [...] |
| murF protein network | https://string-db.org/network/320483.AMF_599 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase (murF); Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pent [...] |
| AMF_601 protein network | https://string-db.org/network/320483.AMF_601 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.378(Affirmative). |
| AMF_602 protein network | https://string-db.org/network/320483.AMF_602 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Possible type IV secretion system protein (virB6); psort: bacterial inner membrane --- Certainty= 0.722(Affirmative); COG3 [...] |
| AMF_603 protein network | https://string-db.org/network/320483.AMF_603 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Possible type IV secretion system protein (virB6); bacterial inner membrane --- Certainty= 0.836(Affirmative) bacterial ou [...] |
| AMF_604 protein network | https://string-db.org/network/320483.AMF_604 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Possible type IV secretion system protein (virB6); psort: bacterial inner membrane --- Certainty= 0.675(Affirmative); COG3 [...] |
| virB6 protein network | https://string-db.org/network/320483.AMF_605 | VirB6; Psort: bacterial inner membrane --- Certainty= 0.626(Affirmative); COG3704 VirB6 type IV secretory pathway, VirB6 components. |
| virB4 protein network | https://string-db.org/network/320483.AMF_606 | VirB4; Psort: bacterial membrane --- Certainty= 0.588(Affirmative); COG3451 VirB4 type IV secretory pathway, VirB4 components. |
| virB3 protein network | https://string-db.org/network/320483.AMF_607 | VirB3; Psort: bacterial inner membrane --- Certainty= 0.213(Affirmative); COG3702 VirB3 type IV secretory pathway, VirB3 components. |
| sodB protein network | https://string-db.org/network/320483.AMF_608 | Fe superoxide dismutase (sodB); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family [...] |
| pstA protein network | https://string-db.org/network/320483.AMF_609 | Phosphate ABC transporter (pstA); Psort: bacterial inner membrane --- Certainty= 0.660(Affirmative); COG0581 PstA ABC-type phosphate transport system, permease component. |
| lipA protein network | https://string-db.org/network/320483.AMF_610 | Lipoic acid synthetase (lipA); Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent [...] |
| AMF_612 protein network | https://string-db.org/network/320483.AMF_612 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.109(Affirmative). |
| AMF_613 protein network | https://string-db.org/network/320483.AMF_613 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.584(Affirmative). |
| pycA protein network | https://string-db.org/network/320483.AMF_614 | propionyl-CoA carboxylase alpha chain precursor (pycA); Psort: bacterial membrane --- Certainty= 0.771(Affirmative); COG1038 PycA pyruvate carboxylase, C-terminal domain/subunit. |
| rluD protein network | https://string-db.org/network/320483.AMF_616 | Ribosomal large subunit pseudouridine synthase D (rluD); Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. |
| rpmB protein network | https://string-db.org/network/320483.AMF_617 | 50S ribosomal protein L28 (rpmB); Psort: bacterial inner membrane --- Certainty= 0.232(Affirmative); COG0227 RpmB ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. |
| priA protein network | https://string-db.org/network/320483.AMF_618 | Primosomal protein N' (priA); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, v [...] |
| AMF_619 protein network | https://string-db.org/network/320483.AMF_619 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.155(Affirmative). |
| hemD protein network | https://string-db.org/network/320483.AMF_620 | HemD; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. |
| AMF_622 protein network | https://string-db.org/network/320483.AMF_622 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.145(Affirmative); COG0006 Xaa-Pro aminopeptidase. |
| AMF_623 protein network | https://string-db.org/network/320483.AMF_623 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.846(Affirmative); COG3577 Predicted aspartyl protease. |
| AMF_624 protein network | https://string-db.org/network/320483.AMF_624 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.037(Affirmative); COG3298 Predicted 3'-5' exonuclease related to the exon [...] |
| era protein network | https://string-db.org/network/320483.AMF_625 | GTP-binding protein ERA (era); An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possib [...] |
| ffh protein network | https://string-db.org/network/320483.AMF_626 | Signal recognition particle protein (ffh); Psort: bacterial cytoplasm --- Certainty= 0.243(Affirmative); COG0541 Ffh signal recognition particle GTPase. |
| nuoL3 protein network | https://string-db.org/network/320483.AMF_628 | NADH dehydrogenase I chain N (nuoL3); Psort: bacterial inner membrane --- Certainty= 0.663(Affirmative); COG1009 NuoL NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antipo [...] |
| AMF_629 protein network | https://string-db.org/network/320483.AMF_629 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outside --- Certainty= 0.300(Affirmative); COG2867 Oligoketide cyclase/lipid transport protein. |
| dnaK protein network | https://string-db.org/network/320483.AMF_630 | DNAK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. |
| rne protein network | https://string-db.org/network/320483.AMF_631 | Ribonuclease E (rne); Psort: bacterial cytoplasm --- Certainty= 0.143(Affirmative); COG1530 CafA ribonucleases G and E. |
| AMF_633 protein network | https://string-db.org/network/320483.AMF_633 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.393(Affirmative); COG1006 Multisubunit Na+/H+ antiporter. |
| AMF_634 protein network | https://string-db.org/network/320483.AMF_634 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.253(Affirmative); COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit. |
| AMF_635 protein network | https://string-db.org/network/320483.AMF_635 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.423(Affirmative); COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit. |
| AMF_636 protein network | https://string-db.org/network/320483.AMF_636 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.404(Affirmative). |
| AMF_637 protein network | https://string-db.org/network/320483.AMF_637 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.283(Affirmative). |
| tktA protein network | https://string-db.org/network/320483.AMF_638 | Transketolase (TktA); Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. |
| AMF_639 protein network | https://string-db.org/network/320483.AMF_639 | Thermostable carboxypeptidase 1 (M32); Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. |
| pal protein network | https://string-db.org/network/320483.AMF_640 | Peptidoglycan-associated lipoprotein precursor; Psort: bacterial inner membrane --- Certainty= 0.291(Affirmative); COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)p [...] |
| purA-2 protein network | https://string-db.org/network/320483.AMF_641 | Adenylosuccinate synthetase (purA); Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belon [...] |
| hflX-2 protein network | https://string-db.org/network/320483.AMF_642 | Putative GTP binding protein (hflX); An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rat [...] |
| yqgF protein network | https://string-db.org/network/320483.AMF_643 | Putative Holliday junction resolvase (YqgF); Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. |
| nrdA protein network | https://string-db.org/network/320483.AMF_644 | Ribonuclease-diphosphate reductase alpha chain (nrdA); Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotid [...] |
| ispA protein network | https://string-db.org/network/320483.AMF_645 | Geranyltranstransferase (farnesyl-diphosphate synthase)(ispA); Psort: bacterial inner membrane --- Certainty= 0.126(Affirmative); COG0142 IspA geranylgeranyl pyrophosphate synthase; Belongs to th [...] |
| AMF_646 protein network | https://string-db.org/network/320483.AMF_646 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.933(Affirmative). |
| thiO protein network | https://string-db.org/network/320483.AMF_647 | Thiamine biosynthesis oxidoreductase (thiO); Psort: bacterial periplasmic space --- Certainty= 0.711(Affirmative); COG0665 DadA Glycine/D-amino acid oxidases (deaminating). |
| dnaB protein network | https://string-db.org/network/320483.AMF_648 | Replicative DNA helicase (dnaB); Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP bind [...] |
| AMF_649 protein network | https://string-db.org/network/320483.AMF_649 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.236(Affirmative). |
| ssnA protein network | https://string-db.org/network/320483.AMF_650 | Cytosine deaminase (ssnA); Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. |
| fabH protein network | https://string-db.org/network/320483.AMF_651 | 3-oxoacyl-[acyl-carrier-protein] synthase III (fabH); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes th [...] |
| plsX protein network | https://string-db.org/network/320483.AMF_652 | Fatty acid/phospholipid synthesis protein (plsX); Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as [...] |
| tgt protein network | https://string-db.org/network/320483.AMF_654 | Queuine tRNA-ribosyltransferase (tgt); Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble positi [...] |
| pstB protein network | https://string-db.org/network/320483.AMF_655 | Phosphate ABC transporter (pstB); Psort: bacterial cytoplasm --- Certainty= 0.075(Affirmative); COG1117 PstB ABC-type phosphate transport system, ATPase component; Belongs to the ABC transporter [...] |
| dapB protein network | https://string-db.org/network/320483.AMF_656 | Dihydrodipicolinate reductase (dapB); Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. |
| AMF_657 protein network | https://string-db.org/network/320483.AMF_657 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.131(Affirmative); COG1853 Conserved protein/domain typically associated with f [...] |
| ubiA protein network | https://string-db.org/network/320483.AMF_658 | 4-hydroxybenzoate octaprenyltransferase (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence [...] |
| aaap protein network | https://string-db.org/network/320483.AMF_659 | Appendage-associated protein; Associates with actin filament appendages that are formed in the inclusion appendages of the parasitophorous vacuole during infection of the host erythrocyte. |
| alp1 protein network | https://string-db.org/network/320483.AMF_660 | Appendage-associated protein-like protein 1 (alp1); Psort: bacterial cytoplasm --- Certainty= 0.077(Affirmative). |
| alp2 protein network | https://string-db.org/network/320483.AMF_662 | Appendage-associated protein-like protein (alp2); Psort: bacterial inner membrane --- Certainty= 0.230(Affirmative). |
| aaap-2 protein network | https://string-db.org/network/320483.AMF_663 | Appendage-associated protein; Psort: bacterial cytoplasm --- Certainty= 0.255(Affirmative). |
| alp3 protein network | https://string-db.org/network/320483.AMF_664 | Appendage-associated protein-like protein 3; Psort: bacterial cytoplasm --- Certainty= 0.340(Affirmative). |
| rnpA protein network | https://string-db.org/network/320483.AMF_665 | Conserved hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. T [...] |
| AMF_667 protein network | https://string-db.org/network/320483.AMF_667 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.561(Affirmative); COG1115 Na+/alanine symporter. |
| AMF_669 protein network | https://string-db.org/network/320483.AMF_669 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.535(Affirmative); COG0658 Predicted multitransmembrane, metal-binding pro [...] |
| pheT protein network | https://string-db.org/network/320483.AMF_670 | phenylalanyl-tRNA synthetase beta chain (pheT); Psort: bacterial inner membrane --- Certainty= 0.193(Affirmative); COG0072 PheT phenylalanyl-tRNA synthetase beta subunit. |
| rplQ protein network | https://string-db.org/network/320483.AMF_671 | 50S ribosomal protein L17 (rplQ); Psort: bacterial cytoplasm --- Certainty= 0.046(Affirmative); COG0203 RplQ ribosomal protein L17. |
| rpoA protein network | https://string-db.org/network/320483.AMF_672 | DNA-directed RNA polymerase alpha chain (rpoA); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rpsK protein network | https://string-db.org/network/320483.AMF_673 | 30S ribosomal protein S11 (rpsK); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome [...] |
| rpsM protein network | https://string-db.org/network/320483.AMF_675 | 30S ribosomal protein S13 (rpsM); Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and pro [...] |
| adk protein network | https://string-db.org/network/320483.AMF_676 | Adenylate kinase (adk); Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide met [...] |
| secY protein network | https://string-db.org/network/320483.AMF_677 | Preprotein translocase secY subunit (secY); The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral ga [...] |
| rplO protein network | https://string-db.org/network/320483.AMF_678 | 50S ribosomal protein L15 (rplO); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. |
| rpsE protein network | https://string-db.org/network/320483.AMF_679 | 30S ribosomal protein S5 (rpsE); With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. |
| rplR protein network | https://string-db.org/network/320483.AMF_680 | 50S ribosomal protein L18 (rplR); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central pr [...] |
| rplF protein network | https://string-db.org/network/320483.AMF_681 | 50S ribosomal protein L6 (rplF); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and nea [...] |
| rpsH protein network | https://string-db.org/network/320483.AMF_682 | 30S ribosomal protein S8 (rpsH); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belo [...] |
| rpsN protein network | https://string-db.org/network/320483.AMF_683 | Small ribosomal protein S14 (rpsN); Psort: bacterial cytoplasm --- Certainty= 0.248(Affirmative); COG0199 RpsN ribosomal protein S14. |
| rplE protein network | https://string-db.org/network/320483.AMF_684 | 50S ribosomal protein L5 (rplE); This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protu [...] |
| rplX protein network | https://string-db.org/network/320483.AMF_685 | 50S ribosomal protein L24 (rplX); Psort: bacterial membrane --- Certainty= 0.102(Affirmative); COG0198 RplX ribosomal protein L24. |
| rplN protein network | https://string-db.org/network/320483.AMF_686 | 50S ribosomal protein L14 (rplN); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. |
| rpsQ protein network | https://string-db.org/network/320483.AMF_687 | 30S ribosomal protein S17 (rpsQ); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. |
| rpmC protein network | https://string-db.org/network/320483.AMF_688 | 50S ribosomal protein L29 (rpmC); Psort: bacterial cytoplasm --- Certainty= 0.398(Affirmative); COG0255 RpmC ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. |
| rplP protein network | https://string-db.org/network/320483.AMF_689 | 50S ribosomal protein L16 (rplP); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. |
| rpsC protein network | https://string-db.org/network/320483.AMF_690 | 30S ribosomal protein S3 (rpsC); Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 famil [...] |
| rplV protein network | https://string-db.org/network/320483.AMF_691 | 50S ribosomal subunit L22 (rplV); This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stage [...] |
| rpsS protein network | https://string-db.org/network/320483.AMF_692 | 30S ribosomal protein S19 (rpsS); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. |
| rplB protein network | https://string-db.org/network/320483.AMF_693 | 50S ribosomal protein L2 (rplB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formati [...] |
| rplW protein network | https://string-db.org/network/320483.AMF_694 | 50S ribosomal protein L23 (rplW); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the ma [...] |
| rplD protein network | https://string-db.org/network/320483.AMF_695 | 50S ribosomal protein L4 (rplD); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. I [...] |
| rplC protein network | https://string-db.org/network/320483.AMF_696 | 50S ribosomal protein L3 (rplC); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the univer [...] |
| rpsJ protein network | https://string-db.org/network/320483.AMF_697 | 30S ribosomal protein S10 (rpsJ); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. |
| tuf-2 protein network | https://string-db.org/network/320483.AMF_698 | Translation elongation factor Tu (tuf); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. |
| trmH protein network | https://string-db.org/network/320483.AMF_699 | Putative tRNA/rRNA methyltransferase TrmH; Psort: bacterial cytoplasm --- Certainty= 0.108(Affirmative); COG0566 SpoU rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase s [...] |
| cmk protein network | https://string-db.org/network/320483.AMF_700 | Cytidylate kinase (cmk); Psort: bacterial cytoplasm --- Certainty= 0.151(Affirmative); COG0283 Cmk cytidylate kinase. |
| rpsA protein network | https://string-db.org/network/320483.AMF_701 | 30S ribosomal protein S1 (rpsA); Psort: bacterial cytoplasm --- Certainty= 0.280(Affirmative); COG0539 RpsA ribosomal protein S1. |
| sppA protein network | https://string-db.org/network/320483.AMF_702 | Protease IV (sppA); Psort: bacterial inner membrane --- Certainty= 0.446(Affirmative); COG0616 SppA periplasmic serine proteases (ClpP class). |
| AMF_703 protein network | https://string-db.org/network/320483.AMF_703 | Hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.655(Affirmative). |
| AMF_704 protein network | https://string-db.org/network/320483.AMF_704 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.292(Affirmative). |
| AMF_705 protein network | https://string-db.org/network/320483.AMF_705 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.435(Affirmative). |
| hemH protein network | https://string-db.org/network/320483.AMF_706 | Ferrochelatase (hemH); Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. |
| AMF_707 protein network | https://string-db.org/network/320483.AMF_707 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.140(Affirmative); COG1485 Predicted ATPase. |
| AMF_708 protein network | https://string-db.org/network/320483.AMF_708 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.216(Affirmative). |
| hflK protein network | https://string-db.org/network/320483.AMF_709 | HFLK protein (hflK); Psort: bacterial inner membrane --- Certainty= 0.397(Affirmative); COG0330 HflC membrane protease subunits, stomatin/prohibitin homologs. |
| AMF_710 protein network | https://string-db.org/network/320483.AMF_710 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.128(Affirmative). |
| recB protein network | https://string-db.org/network/320483.AMF_711 | Putative exodeoxyribonuclease V beta chain; Psort: bacterial cytoplasm --- Certainty= 0.239(Affirmative); COG1074 RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and e [...] |
| qor protein network | https://string-db.org/network/320483.AMF_712 | Quinone oxidoreductase (qor); Psort: bacterial cytoplasm --- Certainty= 0.371(Affirmative); COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases. |
| aprD protein network | https://string-db.org/network/320483.AMF_713 | Alkaline protease secretion ATP-binding protein (aprD); Psort: bacterial inner membrane --- Certainty= 0.478(Affirmative); COG1132 MdlB ABC-type multidrug/protein/lipid transport system, ATPase c [...] |
| folP protein network | https://string-db.org/network/320483.AMF_714 | Dihydropteroate synthase (folP); Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the imm [...] |
| carB protein network | https://string-db.org/network/320483.AMF_716 | Carbamyl-phosphate synthase, large subunit (carB); Psort: bacterial inner membrane --- Certainty= 0.157(Affirmative); COG0458 CarB carbamoylphosphate synthase large subunit (split gene in MJ); Be [...] |
| AMF_717 protein network | https://string-db.org/network/320483.AMF_717 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.355(Affirmative). |
| fumC protein network | https://string-db.org/network/320483.AMF_718 | Fumarate hydratase (fumC); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. |
| dfp-2 protein network | https://string-db.org/network/320483.AMF_719 | Phosphopantothenoylcysteine synthase/decarboxylase (dfp); Psort: bacterial inner membrane --- Certainty= 0.143(Affirmative); COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase. |
| pyrC protein network | https://string-db.org/network/320483.AMF_720 | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. |
| glmM protein network | https://string-db.org/network/320483.AMF_721 | Phosphoglucosamine mutase (glmM/femD); Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. |
| lipB protein network | https://string-db.org/network/320483.AMF_722 | Lipoate-protein ligase B (lipB); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP [...] |
| radC protein network | https://string-db.org/network/320483.AMF_723 | DNA repair protein (radC); Psort: bacterial cytoplasm --- Certainty= 0.267(Affirmative); COG2003 RadC DNA repair proteins; Belongs to the UPF0758 family. |
| groES protein network | https://string-db.org/network/320483.AMF_724 | 10 KD chaperonin (groES); Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. |
| groEL protein network | https://string-db.org/network/320483.AMF_725 | 60 kD chaperonin (groEL); Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. |
| AMF_726 protein network | https://string-db.org/network/320483.AMF_726 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.187(Affirmative); COG1028 Dehydrogenases with different specificities (re [...] |
| clpB protein network | https://string-db.org/network/320483.AMF_728 | ATP-dependent clp protease ATP-binding subunit (clpB); Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with Dn [...] |
| AMF_729 protein network | https://string-db.org/network/320483.AMF_729 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.586(Affirmative). |
| AMF_730 protein network | https://string-db.org/network/320483.AMF_730 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.480(Affirmative). |
| pcxB protein network | https://string-db.org/network/320483.AMF_731 | Protocatechuate 3,4-dioxygenase (pcxB); Psort: bacterial outer membrane --- Certainty= 0.935(Affirmative); COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit. |
| purN protein network | https://string-db.org/network/320483.AMF_733 | Phosphoribosylglycinamide formyl transferase (purN); Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N [...] |
| AMF_735 protein network | https://string-db.org/network/320483.AMF_735 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_505, AMF_509, AMF_571, and AMF_790 ; psort: bacterial inner membrane --- Certainty= 0.544(Affirmative). |
| purQ protein network | https://string-db.org/network/320483.AMF_736 | Phosphoribosylformylglycinamidine synthase I (purQ); Psort: bacterial inner membrane --- Certainty= 0.177(Affirmative); COG0046 PurL phosphoribosylformylglycinamidine (FGAM) synthase, synthetase [...] |
| gidA protein network | https://string-db.org/network/320483.AMF_737 | Glucose inhibited division protein A (gidA); NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cm [...] |
| glpX protein network | https://string-db.org/network/320483.AMF_738 | Fructose-1,6-bisphosphate II (glpX); Psort: bacterial inner membrane --- Certainty= 0.136(Affirmative); COG1494 GlpX fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase. |
| AMF_739 protein network | https://string-db.org/network/320483.AMF_739 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.790(Affirmative); COG0739 Membrane proteins related to metalloendopeptida [...] |
| AMF_740 protein network | https://string-db.org/network/320483.AMF_740 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.187(Affirmative). |
| AMF_741 protein network | https://string-db.org/network/320483.AMF_741 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.183(Affirmative). |
| bioB protein network | https://string-db.org/network/320483.AMF_742 | Biotin synthase (bioB); Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM supe [...] |
| purL protein network | https://string-db.org/network/320483.AMF_743 | Phosphoribosylformylglycinamidine synthase (PurL); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent convers [...] |
| folP-2 protein network | https://string-db.org/network/320483.AMF_744 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (folP/K); Psort: bacterial cytoplasm --- Certainty= 0.253(Affirmative); COG0294 FolP Dihydropteroate synthase and related enzy [...] |
| AMF_745 protein network | https://string-db.org/network/320483.AMF_745 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.247(Affirmative). |
| AMF_747 protein network | https://string-db.org/network/320483.AMF_747 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.193(Affirmative); COG0501 Zn-dependent protease with chaperone function. |
| rsfS protein network | https://string-db.org/network/320483.AMF_748 | Conserved hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 3 [...] |
| AMF_749 protein network | https://string-db.org/network/320483.AMF_749 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.334(Affirmative). |
| AMF_750 protein network | https://string-db.org/network/320483.AMF_750 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.198(Affirmative). |
| purM protein network | https://string-db.org/network/320483.AMF_751 | Phosphoribosylaminoimidazole synthetase (AIR synthetase) (purM); Psort: bacterial cytoplasm --- Certainty= 0.099(Affirmative); COG0150 PurM phosphoribosylaminoimidazol (AIR) synthetase. |
| xerC protein network | https://string-db.org/network/320483.AMF_752 | Integrase/recombinase ripx (xerC); Psort: bacterial cytoplasm --- Certainty= 0.189(Affirmative); COG0582 XerC integrase; Belongs to the 'phage' integrase family. |
| gpsA protein network | https://string-db.org/network/320483.AMF_753 | Gylcerol-3-phosphate dehydrogenase (gpsA); Psort: bacterial inner membrane --- Certainty= 0.191(Affirmative); COG0240 GpsA glycerol 3-phosphate dehydrogenase; Belongs to the NAD-dependent glycero [...] |
| AMF_755 protein network | https://string-db.org/network/320483.AMF_755 | ORF X; Member of the msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). |
| AMF_756 protein network | https://string-db.org/network/320483.AMF_756 | ORF Y; Member of the msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.902(Affirmative). |
| rho-2 protein network | https://string-db.org/network/320483.AMF_758 | Transcription termination factor RHO; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...] |
| hslV protein network | https://string-db.org/network/320483.AMF_759 | Heat shock protein (hslV); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. |
| hslU protein network | https://string-db.org/network/320483.AMF_760 | Heat shock protein (hslU); ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. |
| ubiE protein network | https://string-db.org/network/320483.AMF_761 | Ubiquinone/menaquinone biosynthesis methyltransferase (ubiE); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6 [...] |
| metS protein network | https://string-db.org/network/320483.AMF_762 | methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs [...] |
| lysC protein network | https://string-db.org/network/320483.AMF_764 | Aspartokinase (lysC); Psort: bacterial inner membrane --- Certainty= 0.183(Affirmative); COG0527 LysC aspartokinases; Belongs to the aspartokinase family. |
| AMF_765 protein network | https://string-db.org/network/320483.AMF_765 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative). |
| coxB protein network | https://string-db.org/network/320483.AMF_766 | Cytochrome c oxidase subunit II (coxB); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binucle [...] |
| coxA protein network | https://string-db.org/network/320483.AMF_767 | Cytochrome c oxidase subunit I (coxA); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the [...] |
| ctaB protein network | https://string-db.org/network/320483.AMF_768 | Cytochrome c oxidase assembly factor (ctaB); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side gro [...] |
| bamD protein network | https://string-db.org/network/320483.AMF_769 | Conserved hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
| purD protein network | https://string-db.org/network/320483.AMF_770 | Phosphoribosylamine-glycine ligase (purD); Psort: bacterial cytoplasm --- Certainty= 0.188(Affirmative); COG0151 PurD phosphoribosylamine-glycine ligase; Belongs to the GARS family. |
| yajC protein network | https://string-db.org/network/320483.AMF_771 | Preprotein translocase subunit (yajC); The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into me [...] |
| glmS protein network | https://string-db.org/network/320483.AMF_772 | Glucosamine--fructose-6-phosphate aminotransferase (glmS); Psort: bacterial inner membrane --- Certainty= 0.200(Affirmative); COG0449 GlmS glucosamine 6-phosphate synthetase, contains amidotransf [...] |
| dnaN protein network | https://string-db.org/network/320483.AMF_773 | DNA polymerase III beta chain (dnaN); Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-l [...] |
| rnd-2 protein network | https://string-db.org/network/320483.AMF_774 | Ribonuclease D (rnd); Other copies include: AM151; psort: bacterial cytoplasm --- Certainty= 0.224(Affirmative); COG0349 Rnd ribonuclease D. |
| czcR protein network | https://string-db.org/network/320483.AMF_775 | Transcriptional activator protein (czcR); Psort: bacterial inner membrane --- Certainty= 0.143(Affirmative); COG0745 OmpR response regulators consisting of a CheY-like receiver domain and a winge [...] |
| AMF_776 protein network | https://string-db.org/network/320483.AMF_776 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.151(Affirmative); COG2932 Predicted transcriptional regulator. |
| ppa protein network | https://string-db.org/network/320483.AMF_777 | Inorganic phosphatase protein (ppa); Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. |
| rpsI protein network | https://string-db.org/network/320483.AMF_778 | 30S ribosomal protein S9 (rpsI); Psort: bacterial cytoplasm --- Certainty= 0.329(Affirmative); COG0103 RpsI ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. |
| rplM protein network | https://string-db.org/network/320483.AMF_779 | 50S ribosomal protein L13 (rplM); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early [...] |
| tolC protein network | https://string-db.org/network/320483.AMF_780 | Outer membrane protein (tolC); Psort: bacterial inner membrane --- Certainty= 0.295(Affirmative); COG1538 TolC outer membrane protein. |
| AMF_781 protein network | https://string-db.org/network/320483.AMF_781 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.164(Affirmative). |
| mrp protein network | https://string-db.org/network/320483.AMF_782 | Mrp protein (mrp); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. |
| prsA protein network | https://string-db.org/network/320483.AMF_784 | Ribose-phosphate pyrophosphokinase (prsA); Psort: bacterial periplasmic space --- Certainty= 0.933(Affirmative); COG0462 PrsA phosphoribosylpyrophosphate synthetase. |
| gatC protein network | https://string-db.org/network/320483.AMF_785 | glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...] |
| acnA protein network | https://string-db.org/network/320483.AMF_786 | Aconitate hydratase (acnA); Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. |
| apaG protein network | https://string-db.org/network/320483.AMF_787 | APAG protein; Psort: bacterial cytoplasm --- Certainty= 0.017(Affirmative); COG2967 ApaG uncharacterized protein affecting Mg2+/Co2+ transport. |
| purK protein network | https://string-db.org/network/320483.AMF_788 | Phosphoribosylaminoimidazole carboxylase (purK); Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) [...] |
| AMF_790 protein network | https://string-db.org/network/320483.AMF_790 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_505, AMF_509, AMF_571, and AMF_735 ; psort: bacterial inner membrane --- Certainty= 0.480(Affirmative). |
| AMF_792 protein network | https://string-db.org/network/320483.AMF_792 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.312(Affirmative). |
| AMF_793 protein network | https://string-db.org/network/320483.AMF_793 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_794 psort: bacterial inner membrane --- Certainty= 0.423(Affirmative). |
| AMF_794 protein network | https://string-db.org/network/320483.AMF_794 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_794 psort: bacterial inner membrane --- Certainty= 0.539(Affirmative). |
| virB4-2 protein network | https://string-db.org/network/320483.AMF_796 | VirB4 protein; Psort: bacterial cytoplasm --- Certainty= 0.571(Affirmative); COG3451 VirB4 type IV secretory pathway, VirB4 components. |
| AMF_797 protein network | https://string-db.org/network/320483.AMF_797 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_798, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AM [...] |
| AMF_798 protein network | https://string-db.org/network/320483.AMF_798 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_797, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AM [...] |
| AMF_799 protein network | https://string-db.org/network/320483.AMF_799 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Contains the ORF X internal motif; psort: bacterial inner membrane --- Certainty= 0.408(Affirmative). |
| AMF_800 protein network | https://string-db.org/network/320483.AMF_800 | ORF Y; Psort: bacterial inner membrane --- Certainty= 0.213(Affirmative). |
| AMF_801 protein network | https://string-db.org/network/320483.AMF_801 | ORF X; Psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). |
| msp3 protein network | https://string-db.org/network/320483.AMF_802 | Major surface protein 3 (MSP3); Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.930(Affirmative). |
| hflK-2 protein network | https://string-db.org/network/320483.AMF_803 | hflK protein; HflC and HflK could encode or regulate a protease. |
| hflC protein network | https://string-db.org/network/320483.AMF_804 | hflC protein; HflC and HflK could regulate a protease. |
| AMF_805 protein network | https://string-db.org/network/320483.AMF_805 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.846(Affirmative); COG0265 Trypsin-like serine proteases, typically per [...] |
| AMF_806 protein network | https://string-db.org/network/320483.AMF_806 | Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N [...] |
| rnc protein network | https://string-db.org/network/320483.AMF_807 | Ribonuclease III (rnc); Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes [...] |
| cox11 protein network | https://string-db.org/network/320483.AMF_808 | Cytochrome c oxidase assembly protein (cox11); Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit [...] |
| ana29 protein network | https://string-db.org/network/320483.AMF_811 | Ana29 protein; Psort: bacterial inner membrane --- Certainty= 0.618(Affirmative). |
| AMF_812 protein network | https://string-db.org/network/320483.AMF_812 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.002(Affirmative). |
| AMF_813 protein network | https://string-db.org/network/320483.AMF_813 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.548(Affirmative). |
| AMF_814 protein network | https://string-db.org/network/320483.AMF_814 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.259(Affirmative); COG0612 Predicted Zn-dependent peptidases. |
| AMF_815 protein network | https://string-db.org/network/320483.AMF_815 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative); COG0612 Predicted Zn-dependent peptidases; Belongs to t [...] |
| lspA protein network | https://string-db.org/network/320483.AMF_816 | Lipoprotein signal peptidase (lspA); This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. |
| ribF protein network | https://string-db.org/network/320483.AMF_817 | Riboflavin kinase / FAD synthetase protein (ribF); Psort: bacterial cytoplasm --- Certainty= 0.105(Affirmative); COG0196 RibF FAD synthase; Belongs to the ribF family. |
| grxC1 protein network | https://string-db.org/network/320483.AMF_818 | Glutaredoxin 3 (grxC1); Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. |
| hemK protein network | https://string-db.org/network/320483.AMF_819 | protein-(glutamine-N5) methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Bel [...] |
| map protein network | https://string-db.org/network/320483.AMF_820 | Methionine aminopeptidase (map); Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and u [...] |
| sucB protein network | https://string-db.org/network/320483.AMF_821 | Dihydrolipoamide acetyltransferase component (sucB); Psort: bacterial inner membrane --- Certainty= 0.238(Affirmative); COG0508 AceF dihydrolipoamide acyltransferases. |
| AMF_822 protein network | https://string-db.org/network/320483.AMF_822 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.030(Affirmative); COG0663 Carbonic anhydrases/acetyltransferases, isoleucine p [...] |
| panC protein network | https://string-db.org/network/320483.AMF_823 | Pantoate-beta-alanine ligase (panC); Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthe [...] |
| dacA protein network | https://string-db.org/network/320483.AMF_824 | Serine-type D-Ala-D-Ala carboxypeptidase (dacA); Psort: bacterial periplasmic space --- Certainty= 0.623(Affirmative); COG1686 DacC D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S [...] |
| dsbD protein network | https://string-db.org/network/320483.AMF_825 | C-type cytochrome biogenesis protein (dsbD); Psort: bacterial inner membrane --- Certainty= 0.427(Affirmative); COG0526 TrxA thiol-disulfide isomerase and thioredoxins. |
| AMF_826 protein network | https://string-db.org/network/320483.AMF_826 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.337(Affirmative); COG2938 Uncharacterized ACR. |
| AMF_827 protein network | https://string-db.org/network/320483.AMF_827 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.525(Affirmative); COG0750 Predicted membrane-associated Zn-dependent prot [...] |
| oma87 protein network | https://string-db.org/network/320483.AMF_828 | Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. |
| AMF_829 protein network | https://string-db.org/network/320483.AMF_829 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.944(Affirmative). |
| fabZ protein network | https://string-db.org/network/320483.AMF_830 | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (fabZ); Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain sa [...] |
| purH protein network | https://string-db.org/network/320483.AMF_831 | Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase)(purH); Psort: bacterial inner membrane --- Certainty= 0.162(Affirmative); COG0138 PurH AICAR transformylase/IMP cy [...] |
| pgsA protein network | https://string-db.org/network/320483.AMF_832 | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (pgsA); Psort: bacterial inner membrane --- Certainty= 0.359(Affirmative); COG0558 PgsA phosphatidylglycerophosphate synthase; Be [...] |
| AMF_834 protein network | https://string-db.org/network/320483.AMF_834 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.592(Affirmative); COG0843 Heme/copper-type cytochrome/quinol oxidases, su [...] |
| slt protein network | https://string-db.org/network/320483.AMF_835 | Psort: bacterial inner membrane --- Certainty= 0.293(Affirmative); COG0741 MltE soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). |
| surf1 protein network | https://string-db.org/network/320483.AMF_836 | Surfeit locus protein 1 (surf1); Psort: bacterial inner membrane --- Certainty= 0.501(Affirmative); COG3346 - uncharacterized conserved protein. |
| AMF_837 protein network | https://string-db.org/network/320483.AMF_837 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.917(Affirmative); COG1357 Unchacterized low-complexity proteins. |
| egsA protein network | https://string-db.org/network/320483.AMF_838 | Glycerol-1-phosphate dehydrogenase (NAD(P)); Psort: bacterial inner membrane --- Certainty= 0.359(Affirmative); COG0371 GldA Glycerol dehydrogenase and related enzymes. |
| atpB protein network | https://string-db.org/network/320483.AMF_839 | ATP synthase A chain (atpB); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. |
| atpE protein network | https://string-db.org/network/320483.AMF_841 | ATP synthase C chain (atpE); Psort: bacterial inner membrane --- Certainty= 0.505(Affirmative); COG0636 AtpE F0F1-type ATP synthase c subunit/Archaeal/vacuolar-type H+-ATPase subunit K. |
| AMF_842 protein network | https://string-db.org/network/320483.AMF_842 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.191(Affirmative). |
| AMF_843 protein network | https://string-db.org/network/320483.AMF_843 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.917(Affirmative); Belongs to the ATPase B chain family. |
| ftsA protein network | https://string-db.org/network/320483.AMF_844 | Cell division protein FTSA (ftsA); Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. |
| trkH protein network | https://string-db.org/network/320483.AMF_845 | Potassium uptake protein trkH (trkH); Psort: bacterial inner membrane --- Certainty= 0.639(Affirmative); COG0168 TrkG Trk-type K+ transport systems, membrane components. |
| mesJ protein network | https://string-db.org/network/320483.AMF_846 | Cell cycle protein (mesJ); Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is con [...] |
| ftsH protein network | https://string-db.org/network/320483.AMF_847 | Cell division protein (ftsH); Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane protei [...] |
| secA protein network | https://string-db.org/network/320483.AMF_848 | Preprotein translocase subunit (secA); Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP t [...] |
| AMF_849 protein network | https://string-db.org/network/320483.AMF_849 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.365(Affirmative). |
| czcD protein network | https://string-db.org/network/320483.AMF_850 | Cation efflux system protein (czcD); Psort: bacterial inner membrane --- Certainty= 0.482(Affirmative); COG1230 CzcD Co/Zn/Cd efflux system component. |
| ccmB protein network | https://string-db.org/network/320483.AMF_851 | Heme exporter protein B (ccmB); Psort: bacterial inner membrane --- Certainty= 0.686(Affirmative); COG2386 CcmB ABC-type transport system involved in cytochrome c biogenesis, permease component. |
| dksA protein network | https://string-db.org/network/320483.AMF_852 | dnaK suppressor protein (dksA); Psort: bacterial cytoplasm --- Certainty= 0.549(Affirmative); COG1734 DksA DnaK suppressor protein. |
| dtbS protein network | https://string-db.org/network/320483.AMF_853 | Dethiobiotin synthase (dtbS); Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form [...] |
| ftsY protein network | https://string-db.org/network/320483.AMF_854 | Cell division protein (ftsY); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition p [...] |
| icd protein network | https://string-db.org/network/320483.AMF_855 | Isocitrate dehydrogenase (icd); Psort: bacterial cytoplasm --- Certainty= 0.104(Affirmative); COG0538 Icd isocitrate dehydrogenases. |
| recJ protein network | https://string-db.org/network/320483.AMF_856 | single-stranded-DNA-specific exonuclease (recJ); Psort: bacterial inner membrane --- Certainty= 0.251(Affirmative); COG0608 RecJ single-stranded DNA-specific exonuclease. |
| AMF_857 protein network | https://string-db.org/network/320483.AMF_857 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.134(Affirmative). |
| pcnB protein network | https://string-db.org/network/320483.AMF_858 | Poly (A) polymerase (pcnB); Psort: bacterial cytoplasm --- Certainty= 0.092(Affirmative; COG0617 PcnB tRNA nucleotidyltransferase/poly(A) polymerase. |
| ndk protein network | https://string-db.org/network/320483.AMF_859 | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mecha [...] |
| AMF_860 protein network | https://string-db.org/network/320483.AMF_860 | Transcriptional regulator; Psort: bacterial cytoplasm --- Certainty= 0.191(Affirmative); COG1396 Predicted transcriptional regulators. |
| omp1 protein network | https://string-db.org/network/320483.AMF_861 | Outer membrane protein 1; Member of msp2 superfamily; Also known as Ana37; psort: bacterial periplasmic space --- Certainty= 0.861(Affirmative). |
| opag3 protein network | https://string-db.org/network/320483.AMF_862 | Msp2 operon associated protein 3; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.264(Affirmative). |
| opag2 protein network | https://string-db.org/network/320483.AMF_864 | Msp2 operon associated protein 2; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.548(Affirmative). |
| opag1 protein network | https://string-db.org/network/320483.AMF_865 | Msp2 operon associated protein 1; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.921(Affirmative). |
| msp2 protein network | https://string-db.org/network/320483.AMF_866 | Major surface protein 2 (MSP2); Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.934(Affirmative). |
| AMF_867 protein network | https://string-db.org/network/320483.AMF_867 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.582(Affirmative). |
| AMF_868 protein network | https://string-db.org/network/320483.AMF_868 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.318(Affirmative); COG0694 Thioredoxin-like proteins and domains. |
| omp2 protein network | https://string-db.org/network/320483.AMF_875 | Outer membrane protein 2; Member of msp2 superfamily; psort: bacterial cytoplasm --- Certainty= 0.481(Affirmative). |
| omp3 protein network | https://string-db.org/network/320483.AMF_876 | Outer membrane protein 3; Member of msp2 superfamily; Significant sequence similarity to AMF_56 (highest in C-terminal end); psort: bacterial cytoplasm --- Certainty= 0.225(Affirmative). |
| AMF_877 protein network | https://string-db.org/network/320483.AMF_877 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.191(Affirmative). |
| omp4 protein network | https://string-db.org/network/320483.AMF_878 | Outer membrane protein 4; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.790(Affirmative). |
| AMF_879 protein network | https://string-db.org/network/320483.AMF_879 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.206(Affirmative). |
| omp5 protein network | https://string-db.org/network/320483.AMF_880 | Outer membrane protein 5; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.401(Affirmative). |
| AMF_881 protein network | https://string-db.org/network/320483.AMF_881 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.318(Affirmative); COG0354 Predicted aminomethyltransferase related to GcvT. |
| ccmF protein network | https://string-db.org/network/320483.AMF_882 | Cytochrome c-type biogenesis protein (ccmF); Psort: bacterial inner membrane --- Certainty= 0.529(Affirmative); COG1138 CcmF cytochrome c biogenesis factor. |
| valS protein network | https://string-db.org/network/320483.AMF_883 | valyl-tRNA synthetase (valS); Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such [...] |
| smpB protein network | https://string-db.org/network/320483.AMF_884 | Small protein B-like protein (smpB); Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA wit [...] |
| ribB protein network | https://string-db.org/network/320483.AMF_885 | 3,4-dihydroxy-2-butanone 4-phosphate synthase (ribB); Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family. |
| greA protein network | https://string-db.org/network/320483.AMF_886 | Transcription elongation factor greA (greA); Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of [...] |
| atpA protein network | https://string-db.org/network/320483.AMF_887 | F1-ATP synthase alpha subunit (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta cha [...] |
| atpH protein network | https://string-db.org/network/320483.AMF_888 | ATP synthase delta chain (atpH); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the [...] |
| AMF_889 protein network | https://string-db.org/network/320483.AMF_889 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.401(Affirmative). |
| AMF_890 protein network | https://string-db.org/network/320483.AMF_890 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.609(Affirmative). |
| AMF_891 protein network | https://string-db.org/network/320483.AMF_891 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.930(Affirmative). |
| lolE protein network | https://string-db.org/network/320483.AMF_893 | Lipoprotein-releasing system transmembrane protein (lolE); Psort: bacterial inner membrane --- Certainty= 0.605(Affirmative). |
| holA protein network | https://string-db.org/network/320483.AMF_894 | Putative DNA polymerase III delta subunit (holA); Psort: bacterial cytoplasm --- Certainty= 0.398(Affirmative); COG1466 HolA DNA polymerase III delta subunit. |
| gshA protein network | https://string-db.org/network/320483.AMF_895 | Glutamate-cysteine ligase (gshA); Psort: bacterial cytoplasm --- Certainty= 0.336(Affirmative); COG2918 GshA Gamma-glutamylcysteine synthetase. |
| gltA protein network | https://string-db.org/network/320483.AMF_896 | Citrate synthase (gltA); Psort: bacterial cytoplasm --- Certainty= 0.043(Affirmative); COG0372 GltA citrate synthase. |
| guaA protein network | https://string-db.org/network/320483.AMF_897 | GMP synthase (glutamine-hydrolyzing) (guaA); Catalyzes the synthesis of GMP from XMP. |
| AMF_898 protein network | https://string-db.org/network/320483.AMF_898 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.169(Affirmative). |
| AMF_899 protein network | https://string-db.org/network/320483.AMF_899 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.362(Affirmative). |
| pdhC protein network | https://string-db.org/network/320483.AMF_900 | Dihydrolipoamide acetyltransferase component (pdhC); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). |
| fbaB protein network | https://string-db.org/network/320483.AMF_901 | Fructose-bisphosphate aldolase (fbaB); Psort: bacterial cytoplasm --- Certainty= 0.056(Affirmative); COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase. |
| pbpA1 protein network | https://string-db.org/network/320483.AMF_902 | Penicillin-binding protein (pbpA1); Psort: bacterial inner membrane --- Certainty= 0.348(Affirmative); COG0768 FtsI cell division protein FtsI/penicillin-binding protein 2. |
| secF protein network | https://string-db.org/network/320483.AMF_903 | Protein export membrane protein secF (secF); Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to comp [...] |
| AMF_904 protein network | https://string-db.org/network/320483.AMF_904 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.061(Affirmative); COG0792 Predicted endonuclease distantly related to arc [...] |
| hemA protein network | https://string-db.org/network/320483.AMF_905 | 5-c acid synthase (delta-aminolevulinate synthase) (hemA); Psort: bacterial inner membrane --- Certainty= 0.104(Affirmative); COG0113 HemB delta-aminolevulinic acid dehydratase. |
| tyrS protein network | https://string-db.org/network/320483.AMF_906 | tyrosyl-tRNA synthetase (tyrS); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor [...] |
| glnA-2 protein network | https://string-db.org/network/320483.AMF_907 | Glutamine synthetase (glnA); Psort: bacterial inner membrane --- Certainty= 0.251(Affirmative); COG0174 GlnA glutamine synthase; Belongs to the glutamine synthetase family. |
| mraY1 protein network | https://string-db.org/network/320483.AMF_908 | Phospho-n-acetylmuramoyl-pentapeptide- transferase (mraY1); First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family [...] |
| ispB protein network | https://string-db.org/network/320483.AMF_909 | Octaprenyl-diphosphate synthase (ispB); Psort: bacterial inner membrane --- Certainty= 0.181(Affirmative); COG0142 IspA geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase fam [...] |
| AMF_910 protein network | https://string-db.org/network/320483.AMF_910 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.310(Affirmative). |
| mkl protein network | https://string-db.org/network/320483.AMF_911 | Ribonucleotide transport ATP-binding protein (mkl); Psort: bacterial cytoplasm --- Certainty= 0.267(Affirmative); COG1127 Ttg2A ABC-type exporter of toluene and related compounds, ATPase componen [...] |
| AMF_912 protein network | https://string-db.org/network/320483.AMF_912 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.365(Affirmative); COG0767 ABC-type toluene export system, permease compon [...] |
| rpe protein network | https://string-db.org/network/320483.AMF_913 | Ribulose-phosphate 3-epimerase (rpe); Psort: bacterial inner membrane --- Certainty= 0.126(Affirmative); COG0036 Rpe pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase [...] |
| polA protein network | https://string-db.org/network/320483.AMF_914 | DNA polymerase I (polA); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. |
| AMF_915 protein network | https://string-db.org/network/320483.AMF_915 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.711(Affirmative). |
| argF protein network | https://string-db.org/network/320483.AMF_916 | Ornithine carbamoyltransferase (argF); Psort: bacterial cytoplasm --- Certainty= 0.023(Affirmative); COG0078 ArgF ornithine carbamoyltransferase. |
| recF protein network | https://string-db.org/network/320483.AMF_917 | RECF protein (recF); The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It a [...] |
| omp6 protein network | https://string-db.org/network/320483.AMF_918 | Outer membrane protein 6; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.794(Affirmative). |
| omp7 protein network | https://string-db.org/network/320483.AMF_919 | Outer membrane protein 7; Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.508(Affirmative). |
| omp8 protein network | https://string-db.org/network/320483.AMF_920 | Outer membrane protein 8; Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.356(Affirmative). |
| omp9 protein network | https://string-db.org/network/320483.AMF_921 | Outer membrane protein 9; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.444(Affirmative). |
| omp10 protein network | https://string-db.org/network/320483.AMF_922 | Outer membrane protein 10; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.281(Affirmative). |
| AMF_926 protein network | https://string-db.org/network/320483.AMF_926 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.007(Affirmative). |
| mviN protein network | https://string-db.org/network/320483.AMF_929 | Virulence factor MVIN (mviN); Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. |
| lgt protein network | https://string-db.org/network/320483.AMF_930 | Prolipoprotein diacylglyceryl transferase (lgt); Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotei [...] |
| rpsT protein network | https://string-db.org/network/320483.AMF_931 | 30S ribosomal protein S20 (rpsT); Binds directly to 16S ribosomal RNA. |
| plsC protein network | https://string-db.org/network/320483.AMF_932 | 1-acyl-sn-glycerol-3-phosphate acyltransferase (plsC); Psort: bacterial inner membrane --- Certainty= 0.385(Affirmative); COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase. |
| def-2 protein network | https://string-db.org/network/320483.AMF_933 | N-formylmethionylaminoacyl-tRNA deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-ter [...] |
| AMF_934 protein network | https://string-db.org/network/320483.AMF_934 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.312(Affirmative); COG1573 Uracil-DNA glycosylase. |
| AMF_936 protein network | https://string-db.org/network/320483.AMF_936 | Hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.915(Affirmative). |
| AMF_937 protein network | https://string-db.org/network/320483.AMF_937 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.257(Affirmative). |
| AMF_938 protein network | https://string-db.org/network/320483.AMF_938 | Hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.286(Affirmative). |
| AMF_939 protein network | https://string-db.org/network/320483.AMF_939 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_940 psort: bacterial cytoplasm --- Certainty= 0.394(Affirmative). |
| AMF_940 protein network | https://string-db.org/network/320483.AMF_940 | Hypothetical protein called by Glimmer 2; Significant similarity to AMF_939 psort: bacterial cytoplasm --- Certainty= 0.115(Affirmative). |
| uvrB protein network | https://string-db.org/network/320483.AMF_941 | Excinuclease ABC subunit B (uvrB); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA [...] |
| secD protein network | https://string-db.org/network/320483.AMF_942 | Protein-export membrane protein (secD); Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete [...] |
| AMF_946 protein network | https://string-db.org/network/320483.AMF_946 | ORF Y; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.676(Affirmative). |
| AMF_947 protein network | https://string-db.org/network/320483.AMF_947 | ORF X; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). |
| ubiD protein network | https://string-db.org/network/320483.AMF_948 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Psort: bacterial inner membrane --- Certainty= 0.106(Affirmative); COG0043 UbiD 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylas [...] |
| omp11 protein network | https://string-db.org/network/320483.AMF_949 | Outer membrane protein 11; Member of the msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.785(Affirmative). |
| omp12 protein network | https://string-db.org/network/320483.AMF_950 | Outer membrane protein 12; Member of the msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.940(Affirmative). |
| omp13 protein network | https://string-db.org/network/320483.AMF_951 | Outer membrane protein 13; Member of the msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.353(Affirmative). |
| ftsZ protein network | https://string-db.org/network/320483.AMF_952 | Cell division protein (ftsZ); Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the t [...] |
| ybeY protein network | https://string-db.org/network/320483.AMF_953 | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. |
| parA protein network | https://string-db.org/network/320483.AMF_954 | Chromosome partitioning protein (parA); Psort: bacterial cytoplasm --- Certainty= 0.252(Affirmative); COG1192 Soj ATPases involved in chromosome partitioning. |
| parB protein network | https://string-db.org/network/320483.AMF_955 | Chromosome partitioning protein (parB); Psort: bacterial cytoplasm --- Certainty= 0.231(Affirmative); COG1475 Spo0J predicted transcriptional regulators; Belongs to the ParB family. |
| rimM protein network | https://string-db.org/network/320483.AMF_957 | 16S rRNA processing protein (rimM); An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S [...] |
| trmD protein network | https://string-db.org/network/320483.AMF_958 | tRNA (guanine-N1)-methyltransferase (trmD); Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. |
| rplS protein network | https://string-db.org/network/320483.AMF_959 | 50S ribosomal subunit L19 (rplS); This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. |
| cinA protein network | https://string-db.org/network/320483.AMF_960 | Competence / damage-inducible protein (cinA); Psort: bacterial inner membrane --- Certainty= 0.304(Affirmative); COG1058 CinA predicted nucleotide-utilizing enzyme related to molybdopterin-biosyn [...] |
| thrS protein network | https://string-db.org/network/320483.AMF_961 | Threonyl-tRNA synthetase (thrS); Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acce [...] |
| infC protein network | https://string-db.org/network/320483.AMF_962 | Translation initiation factor IF-3 (infC); Psort: bacterial cytoplasm --- Certainty= 0.223(Affirmative); COG0290 InfC translation initiation factor IF3; Belongs to the IF-3 family. |
| AMF_963 protein network | https://string-db.org/network/320483.AMF_963 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.153(Affirmative); COG0802 Predicted ATPase or kinase. |
| AMF_964 protein network | https://string-db.org/network/320483.AMF_964 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.459(Affirmative); COG0670 Integral membrane protein, interacts with FtsH; [...] |
| asd protein network | https://string-db.org/network/320483.AMF_965 | Aspartate-semialdehyde dehydrogenase (asd); Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to [...] |
| AMF_966 protein network | https://string-db.org/network/320483.AMF_966 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC fami [...] |
| dnaZ protein network | https://string-db.org/network/320483.AMF_967 | DNA polymerase III gamma subunit (dnaZ); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to [...] |
| gapA protein network | https://string-db.org/network/320483.AMF_968 | Psort: bacterial cytoplasm --- Certainty= 0.128(Affirmative); COG0057 GapA glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase. |
| AMF_970 protein network | https://string-db.org/network/320483.AMF_970 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.448(Affirmative). |
| elbB protein network | https://string-db.org/network/320483.AMF_971 | Enhancing lycopene biosynthesis protein 2; Psort: bacterial inner membrane --- Certainty= 0.289(Affirmative); COG3155 ElbB Uncharacterized sigma cross-reacting protein 27A (ES1 or KNP-I alpha pro [...] |
| ftsW protein network | https://string-db.org/network/320483.AMF_972 | Cell division protein ftsW (ftsW); Psort: bacterial inner membrane --- Certainty= 0.595(Affirmative); COG0772 FtsW bacterial cell division membrane protein; Belongs to the SEDS family. |
| metK protein network | https://string-db.org/network/320483.AMF_973 | S-adenosylmethionine synthetase (metK); Psort: bacterial inner membrane --- Certainty= 0.121(Affirmative); COG0192 MetK S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family. |
| ubiH protein network | https://string-db.org/network/320483.AMF_974 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (ubiH); Psort: bacterial inner membrane --- Certainty= 0.238(Affirmative); COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and re [...] |
| AMF_975 protein network | https://string-db.org/network/320483.AMF_975 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.654(Affirmative). |
| glyQ protein network | https://string-db.org/network/320483.AMF_976 | glycyl-tRNA synthetase alpha subunit (glyQ); Psort: bacterial cytoplasm --- Certainty= 0.269(Affirmative); COG0752 GlyQ glycyl-tRNA synthetase, alpha subunit. |
| glyS protein network | https://string-db.org/network/320483.AMF_977 | glycyl-tRNA synthetase beta chain (glyS); Psort: bacterial inner membrane --- Certainty= 0.179(Affirmative); COG0751 GlyS glycyl-tRNA synthetase, beta subunit. |
| dnaJ protein network | https://string-db.org/network/320483.AMF_978 | DNAJ protein (dnaJ); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an aut [...] |
| nadC protein network | https://string-db.org/network/320483.AMF_979 | Nicotinate-nucleotide pyrophosphorylase (nadC); Psort: bacterial cytoplasm --- Certainty= 0.379(Affirmative); COG0157 NadC nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family [...] |
| plsY protein network | https://string-db.org/network/320483.AMF_980 | Conserved hypothetical protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes ac [...] |
| ruvC protein network | https://string-db.org/network/320483.AMF_981 | Holliday (crossover) junction endodeoxyribonuclease (ruvC); Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by [...] |
| coxC protein network | https://string-db.org/network/320483.AMF_982 | Cytochrome C oxidase, subunit III (coxC); Psort: bacterial inner membrane --- Certainty= 0.370(Affirmative); COG1845 CyoC heme/copper-type cytochrome/quinol oxidase, subunit 3. |
| hemE protein network | https://string-db.org/network/320483.AMF_983 | Uroporphyrinogen decarboxylase (hemE); Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. |
| AMF_984 protein network | https://string-db.org/network/320483.AMF_984 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.230(Affirmative); COG1253 Hemolysins and related proteins containing CBS [...] |
| AMF_985 protein network | https://string-db.org/network/320483.AMF_985 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.213(Affirmative); COG3740 - phage head maturation protease. |
| AMF_986 protein network | https://string-db.org/network/320483.AMF_986 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.054(Affirmative). |
| AMF_987 protein network | https://string-db.org/network/320483.AMF_987 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.168(Affirmative); COG0500 SAM-dependent methyltransferases. |
| nadA protein network | https://string-db.org/network/320483.AMF_988 | Quinolinate synthetase A (NadA); Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. |
| fdxA protein network | https://string-db.org/network/320483.AMF_989 | Ferredoxin II (fdxA); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. |
| ilvC protein network | https://string-db.org/network/320483.AMF_990 | Ketol-acid reductoisomerase (ilvC); Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) [...] |
| infC-2 protein network | https://string-db.org/network/320483.AMF_991 | Translation initiation factor IF-3 (infC); Psort: bacterial cytoplasm --- Certainty= 0.514(Affirmative); COG0290 InfC translation initiation factor IF3; Belongs to the IF-3 family. |
| virD4 protein network | https://string-db.org/network/320483.AMF_992 | VirD4 protein (virD4); Psort: bacterial inner membrane --- Certainty= 0.355(Affirmative); COG3505 VirD4 type IV secretory pathway, VirD4 components. |
| virB11 protein network | https://string-db.org/network/320483.AMF_993 | VirB11 protein (virB11); Part of the Type IV secretion system. Belongs to the GSP E family. |
| virB10 protein network | https://string-db.org/network/320483.AMF_994 | VirB10 protein (virB10); Psort: bacterial inner membrane --- Certainty= 0.334(Affirmative); COG2948 VirB10 type IV secretory pathway, VirB10 components. |
| virB9 protein network | https://string-db.org/network/320483.AMF_995 | VirB9 protein (virB9); Psort: bacterial periplasmic space --- Certainty= 0.742(Affirmative); COG3504 VirB9 type IV secretory pathway, VirB9 components. |
| virB8 protein network | https://string-db.org/network/320483.AMF_996 | VirB8 protein (virB8); Psort: bacterial inner membrane --- Certainty= 0.576(Affirmative); COG3736 VirB8 type IV secretion system, component VirB8. |
| ribA protein network | https://string-db.org/network/320483.AMF_997 | GTP cyclohydrolase II (ribA); Psort: bacterial cytoplasm --- Certainty= 0.289(Affirmative); COG0807 RibA GTP cyclohydrolase II. |
| AMF_998 protein network | https://string-db.org/network/320483.AMF_998 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.438(Affirmative). |
| AMF_999 protein network | https://string-db.org/network/320483.AMF_999 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.408(Affirmative). |